AutismKB 2.0

Annotation Detail for PIF1


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Basic Information Top
Gene Symbol:PIF1 ( C15orf20,PIF )
Gene Full Name: PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
Band: 15q22.31
Quick LinksEntrez ID:80119; OMIM: 610953; Uniprot ID:PIF1_HUMAN; ENSEMBL ID: ENSG00000140451; HGNC ID: 26220
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
151Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_025049
  • Location:chr15 62894887-62904890
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 62904571 62905344 773 67
H3ac HepG2E 62904289 62905546 1257 27
LIN9 SGSE7516 62904289 62905546 1257 27
PHF8 HeLaGSE20725 62904458 62905372 914 25
USF2 HepG2E 62904861 62905546 685 313
p130 QuiescentGSE19898 62904775 62905241 466 118
p130 SenescentGSE19898 62904287 62905524 1237 15
p130 shRbSenescentGSE19898 62904453 62905466 1013 69
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 62889166 62889542 376 5534
CTCF CD4SISSRdata 62889166 62889542 376 5534
CTCF HelaGSE12889 62889237 62889489 252 5525
CTCF JurkatGSE12889 62889180 62889540 360 5528
CTCF G2GSE9613 62889166 62889846 680 5382
ER Breast-CancerGSE22609 62892269 62892787 518 2360
ER MCF7GSE19013 62892054 62892861 807 2430
Rb GrowingGSE19898 62889179 62889415 236 5591
TFAP2C MCF7GSE21234 62891028 62891472 444 3638
hScc1 BcellGSE12603 62889166 62889701 535 5454
hScc1 CdLSGSE12603 62889166 62889809 643 5400
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 62895771 62896137 366 0
CTCF G2GSE9613 62897131 62897350 219 0
CTCF G2GSE9613 62900324 62900773 449 0
CTCF G2GSE9613 62903059 62903421 362 0
E2F4 G0GSE7516 62904403 62905335 932 0
LIN9 G0GSE7516 62904289 62905374 1085 0
Oct1 HelaGSE14283 62895314 62895359 45 0
hScc1 BcellGSE12603 62897131 62897629 498 0
hScc1 BcellGSE12603 62903059 62903788 729 0
p130 QuiescentGSE19898 62904472 62904768 296 0
p130 shRbQuiescentGSE19898 62904261 62905499 1238 0
p130 G0GSE7516 62904289 62905482 1193 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018