AutismKB 2.0

Annotation Detail for VCPIP1


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Basic Information Top
Gene Symbol:VCPIP1 ( DKFZp686G038,DUBA3,FLJ23132,FLJ60694,KIAA1850,VCIP135 )
Gene Full Name: valosin containing protein (p97)/p47 complex interacting protein 1
Band: 8q13.1
Quick LinksEntrez ID:80124; OMIM: 611745; Uniprot ID:VCIP1_HUMAN; ENSEMBL ID: ENSG00000175073; HGNC ID: 30897
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
408N6-acetyllysine.
747Phosphoserine.
757Phosphoserine.
761Phosphothreonine.
763Phosphothreonine.
767Phosphotyrosine.
770Phosphothreonine.
994Phosphoserine.
998Phosphoserine.
1198Phosphoserine.
Location(AA) Modifications Resource
747Phosphoserine.Swiss-Prot 53.0
747PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
23O-linkedHMM predict
23Phosphothreonine(CDK)HMM predict
23Phosphothreonine(MAPK)HMM predict
25Phosphoserine(MAPK)HMM predict
25O-linkedHMM predict
25Phosphoserine(IKK)HMM predict
26O-linkedHMM predict
29O-linkedHMM predict
48Phosphoserine(IKK)HMM predict
202N-linkedHMM predict
318Phosphotyrosine(Jak)HMM predict
355Phosphotyrosine(INSR)HMM predict
507N-linkedHMM predict
513N-linkedHMM predict
534N-linkedHMM predict
539N-linkedHMM predict
585Phosphotyrosine(INSR)HMM predict
585Phosphotyrosine(Syk)HMM predict
617Phosphoserine(IKK)HMM predict
617Phosphoserine(CK1)HMM predict
623Phosphotyrosine(Syk)HMM predict
623Phosphotyrosine(Abl)HMM predict
663Phosphotyrosine(INSR)HMM predict
686Phosphoserine(ATM)HMM predict
708N-linkedHMM predict
719N-linkedHMM predict
732Phosphothreonine(PKC)HMM predict
747Phosphoserine(IKK)HMM predict
747Phosphoserine(CDC2)HMM predict
756O-linkedHMM predict
757O-linkedHMM predict
757O-linkedHMM predict
761Phosphothreonine(CDK)HMM predict
761Phosphothreonine(MAPK)HMM predict
761O-linkedHMM predict
767Phosphotyrosine(Jak)HMM predict
768O-linkedHMM predict
768Phosphoserine(IKK)HMM predict
881Phosphoserine(PKG)HMM predict
953N-linkedHMM predict
997Phosphoserine(CK1)HMM predict
998Phosphoserine(ATM)HMM predict
998PhosphoserineHMM predict
998Phosphoserine(CK1)HMM predict
1021N-linkedHMM predict
1048Phosphothreonine(PKA)HMM predict
1062N-linkedHMM predict
1063Phosphoserine(CDC2)HMM predict
1070O-linkedHMM predict
1076Phosphoserine(CK2)HMM predict
1128Phosphoserine(IKK)HMM predict
1146Phosphoserine(CDC2)HMM predict
1150Phosphoserine(IKK)HMM predict
1207Phosphoserine(ATM)HMM predict
1207PhosphoserineHMM predict
1214N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_025054
  • Location:chr8 67705042-67742005
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 67741609 67742425 816 12
ETS1 JurkatGSE17954 67741395 67742984 1589 184
GABP HelaGSE8489 67742129 67742746 617 432
H3K4me3 colorectalcancer 67742389 67742746 357 562
H3ac HepG2E 67742217 67742746 529 476
H3ac HepG2E 67743572 67744103 531 1832
TAF HelaGSE8489 67742129 67742746 617 432
TAF k562GSE8489 67742181 67742746 565 458
TAF k562GSE8489 67743572 67744103 531 1832
USF2 HepG2E 67742425 67742746 321 580
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 67687262 67688704 1442 17060
CTCF G2GSE9613 67694093 67694382 289 10805
ETS1 JurkatGSE17954 67687912 67689120 1208 16527
FOXA1 MCF7GSE15244 67688411 67689021 610 16327
H3ac HepG2E 67688480 67689310 830 16148
KLF4 hESGSE17917 67687583 67687793 210 17355
PHF8 HeLaGSE20725 67687257 67688833 1576 16998
RARA MCF7GSE15244 67688516 67689269 753 16150
RARG MCF7GSE15244 67688480 67689021 541 16292
Rb shRbSenescenceGSE19898 67703552 67703735 183 1399
TFAP2C MCF7GSE21234 67687444 67687781 337 17430
hScc1 BcellGSE12603 67687157 67688890 1733 17019
hScc1 CdLSGSE12603 67687631 67688668 1037 16893
hScc1 G2GSE9613 67687193 67688818 1625 17037
p130 QuiescentGSE19898 67687867 67688550 683 16834
p130 SenescentGSE19898 67687635 67688530 895 16960
p130 shRbQuiescentGSE19898 67687933 67688244 311 16954
p130 shRbSenescentGSE19898 67687238 67688616 1378 17116
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 67740663 67742569 1906 0
GATA3 MCF7GSE15244 67740453 67741739 1286 0
H3K4me2 HCT116GSE10453 67739466 67741498 2032 0
H3K4me3 colorectalcancer 67736872 67737426 554 0
H3K4me3 colorectalcancer 67739686 67741498 1812 0
H3ac HepG2E 67736872 67737426 554 0
H3ac HepG2E 67739085 67741534 2449 0
P300 T30-glioblastomaGSE21026 67740865 67742877 2012 0
RARA MCF7GSE15244 67740453 67741461 1008 0
RARG MCF7GSE15244 67740453 67741650 1197 0
TAF HelaGSE8489 67740874 67741870 996 0
TAF k562GSE8489 67739237 67741778 2541 0
hScc1 BcellGSE12603 67741112 67742015 903 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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