AutismKB 2.0

Annotation Detail for BRD3


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Basic Information Top
Gene Symbol:BRD3 ( FLJ23227,FLJ41328,KIAA0043,ORFX,RING3L )
Gene Full Name: bromodomain containing 3
Band: 9q34.2
Quick LinksEntrez ID:8019; OMIM: 601541; Uniprot ID:BRD3_HUMAN; ENSEMBL ID: ENSG00000169925; HGNC ID: 1104
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
259Phosphoserine.
263Phosphoserine.
281Phosphoserine.
563Phosphoserine.
680Phosphoserine.
682Phosphoserine.
Location(AA) Modifications Resource
263Phosphoserine.Swiss-Prot 53.0
263PhosphoserinePhospho.ELM 6.0
563Phosphoserine.Swiss-Prot 53.0
563PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
15Phosphothreonine(MAPK)HMM predict
15O-linkedHMM predict
27O-linkedHMM predict
28N-linkedHMM predict
73Phosphotyrosine(INSR)HMM predict
94SulfotyrosineHMM predict
175O-linkedHMM predict
176O-linkedHMM predict
178Phosphoserine(CDC2)HMM predict
178Phosphoserine(CDK)HMM predict
181Phosphothreonine(MAPK)HMM predict
189O-linkedHMM predict
191O-linkedHMM predict
199O-linkedHMM predict
199O-linkedHMM predict
199Phosphothreonine(MAPK)HMM predict
203O-linkedHMM predict
207N-linkedHMM predict
209O-linkedHMM predict
209O-linkedHMM predict
210O-linkedHMM predict
210O-linkedHMM predict
233O-linkedHMM predict
233Phosphothreonine(MAPK)HMM predict
248O-linkedHMM predict
252O-linkedHMM predict
253O-linkedHMM predict
254O-linkedHMM predict
259O-linkedHMM predict
261O-linkedHMM predict
263Phosphoserine(ATM)HMM predict
263Phosphoserine(IKK)HMM predict
263Phosphoserine(PKA)HMM predict
281Phosphoserine(PKG)HMM predict
348Phosphotyrosine(INSR)HMM predict
370SulfotyrosineHMM predict
442PhosphoserineHMM predict
442Phosphoserine(CK1)HMM predict
443Phosphoserine(CK1)HMM predict
447Phosphoserine(CK1)HMM predict
448Phosphoserine(CK1)HMM predict
448Phosphoserine(ATM)HMM predict
450Phosphoserine(IKK)HMM predict
452Phosphoserine(CK2)HMM predict
455Phosphoserine(CK2)HMM predict
541N-linkedHMM predict
561SulfotyrosineHMM predict
563Phosphoserine(CK2)HMM predict
605Phosphoserine(PKB)HMM predict
681Phosphoserine(CDC2)HMM predict
696O-linkedHMM predict
703Phosphoserine(CK1)HMM predict
703Phosphoserine(CK2)HMM predict
707Phosphoserine(CK1)HMM predict
708Phosphoserine(CK1)HMM predict
710Phosphoserine(IKK)HMM predict
720Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_007371
  • Location:chr9 135887783-135922912
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 135922837 135923951 1114 482
PHF8 293TGSE20725 135923163 135924005 842 672
hScc1 BcellGSE12603 135923281 135923604 323 530
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 135879959 135880588 629 7510
GABP k562GSE8489 135866824 135869622 2798 19561
HIF1 HypoHepG2 135866824 135869622 2798 19561
Myc K562GSE19551 135879952 135880581 629 7517
TAF HelaGSE8489 135866824 135869622 2798 19561
TAF k562GSE8489 135866824 135869622 2798 19561
VDR GM10855-UnstimGSE22484 135879777 135881019 1242 7386
hScc1 BcellGSE12603 135868584 135869472 888 18756
hScc1 BcellGSE12603 135886027 135886303 276 1619
p130 QuiescentGSE19898 135880254 135880401 147 7456
p130 SenescentGSE19898 135880038 135880236 198 7647
p130 SenescentGSE19898 135880802 135881073 271 6846
p130 shRbSenescentGSE19898 135880229 135880379 150 7480
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 135921046 135921661 615 0
H3K4me3 colorectalcancer 135921307 135921940 633 0
H3ac HepG2E 135920409 135922258 1849 0
P300 T30-glioblastomaGSE21026 135910791 135911537 746 0
TFAP2C MCF7GSE21234 135910761 135912147 1386 0
TFAP2C MCF7GSE21234 135916497 135918157 1660 0
TFAP2C MCF7GSE21234 135920420 135921015 595 0
hScc1 BcellGSE12603 135894633 135894974 341 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-141 hsa-mir-141 12 20053927
hsa-miR-141* hsa-mir-141 12 20053927
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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