Annotation Detail for RUFY1
Basic Information Top
| Gene Symbol: | RUFY1 ( FLJ22251,RABIP4,ZFYVE12 ) |
|---|---|
| Gene Full Name: | RUN and FYVE domain containing 1 |
| Band: | 5q35.3 |
| Quick Links | Entrez ID:80230; OMIM: 610327; Uniprot ID:RUFY1_HUMAN; ENSEMBL ID: ENSG00000176783; HGNC ID: 19760 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 389 | Phosphotyrosine. | |
| 400 | Phosphotyrosine. | |
| 618 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 389 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 389 | Phosphotyrosine (BMX) | Phospho.ELM 6.0 |
| 400 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 400 | Phosphotyrosine (PKC alpha) | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 28 | Phosphoserine(IKK) | HMM predict |
| 42 | Phosphoserine(ATM) | HMM predict |
| 68 | Phosphothreonine(PKC) | HMM predict |
| 74 | Phosphothreonine(PKA) | HMM predict |
| 105 | Phosphoserine(PKB) | HMM predict |
| 105 | Phosphoserine(IKK) | HMM predict |
| 123 | Phosphoserine(PKG) | HMM predict |
| 133 | Phosphoserine(CK1) | HMM predict |
| 170 | N-linked | HMM predict |
| 238 | Phosphotyrosine(Syk) | HMM predict |
| 275 | Phosphoserine(CK1) | HMM predict |
| 337 | Phosphoserine(CK1) | HMM predict |
| 475 | Phosphoserine(CK1) | HMM predict |
| 538 | Phosphoserine(ATM) | HMM predict |
| 546 | Phosphoserine(CK1) | HMM predict |
| 571 | Phosphothreonine(CK2) | HMM predict |
| 618 | Phosphoserine(ATM) | HMM predict |
| 656 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_001040452
- Location:chr5 178919337-178969624
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 178969590 | 178970201 | 611 | 271 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 178919325 | 178919724 | 399 | 0 |
| CTCF | G2 | GSE9613 | 178965670 | 178966068 | 398 | 0 |
| Myc | hES | GSE17917 | 178919423 | 178919817 | 394 | 0 |
| NRSF | Jurkat | SISSRdata | 178947849 | 178948051 | 202 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 178947697 | 178948064 | 367 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 178947730 | 178948159 | 429 | 0 |
| PHF8 | 293T | GSE20725 | 178918798 | 178919972 | 1174 | 0 |
| Rb | Quiescent | GSE19898 | 178952262 | 178952392 | 130 | 0 |
| p130 | shRbQuiescent | GSE19898 | 178919357 | 178919993 | 636 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21976 | mRNA | RUFY1 | chr5 | 178910192 | 178969618 | 32 | mRNA | chr5 | 178955510 | 178963348 | Sense/Antisense (SA) pairs | |