AutismKB 2.0

Annotation Detail for STAM


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Basic Information Top
Gene Symbol:STAM ( DKFZp686J2352,STAM1 )
Gene Full Name: signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
Band: 10p12.33
Quick LinksEntrez ID:8027; OMIM: 601899; Uniprot ID:STAM1_HUMAN; ENSEMBL ID: ENSG00000136738; HGNC ID: 11357
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
156Phosphoserine.
198Phosphotyrosine.
381Phosphotyrosine.
384Phosphotyrosine.
Location(AA) Modifications Resource
156Phosphoserine.Swiss-Prot 53.0
197PhosphotyrosinePhospho.ELM 6.0
198Phosphotyrosine.Swiss-Prot 53.0
381Phosphotyrosine.Swiss-Prot 53.0
Location(AA) Modification Resource
18Phosphoserine(CK2)HMM predict
74Phosphoserine(IKK)HMM predict
191Phosphoserine(IKK)HMM predict
192O-linkedHMM predict
196O-linkedHMM predict
200O-linkedHMM predict
203Phosphoserine(IKK)HMM predict
203Phosphoserine(CK1)HMM predict
277PhosphothreonineHMM predict
281Phosphothreonine(PKC)HMM predict
358Phosphoserine(CK1)HMM predict
392Phosphotyrosine(Syk)HMM predict
402Phosphoserine(ATM)HMM predict
405Phosphotyrosine(Syk)HMM predict
405Phosphotyrosine(Abl)HMM predict
411O-linkedHMM predict
436Phosphoserine(CK1)HMM predict
437Phosphoserine(CK1)HMM predict
439Phosphoserine(ATM)HMM predict
456O-linkedHMM predict
475O-linkedHMM predict
480Phosphotyrosine(Abl)HMM predict
481O-linkedHMM predict
487O-linkedHMM predict
492O-linkedHMM predict
512N-linkedHMM predict
524O-linkedHMM predict
524Phosphoserine(ATM)HMM predict
534Phosphotyrosine(Abl)HMM predict
535Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003473
  • Location:chr10 17726129-17797912
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 17725410 17726667 1257 91
Oct1 HelaGSE14283 17724607 17724642 35 1505
PolII HeLaGSE12783 17725238 17726859 1621 81
RARA MCF7GSE15244 17725541 17725949 408 385
RARG MCF7GSE15244 17725541 17726095 554 312
TAF k562GSE8489 17725078 17725873 795 654
p130 SenescentGSE19898 17725416 17726512 1096 166
p130 shRbQuiescentGSE19898 17725418 17726685 1267 78
p130 shRbSenescentGSE19898 17725477 17726512 1035 135
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 17801398 17801465 67 3519
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Gata2 K562GSE18868 17744513 17745185 672 0
H3K4me2 HCT116GSE10453 17726847 17728409 1562 0
H3K4me3 colorectalcancer 17726574 17727389 815 0
H3ac HepG2E 17725116 17729025 3909 0
Myc K562GSE19551 17744535 17745112 577 0
Myc K562GSE19551 17771238 17771451 213 0
NFkBII GM12878GSE19485 17750480 17752671 2191 0
NFkBII GM12878GSE19485 17765722 17768307 2585 0
NFkBII GM18505GSE19485 17766787 17768019 1232 0
Nanog hESGSE18292 17740811 17741161 350 0
Oct1 HelaGSE14283 17743950 17743996 46 0
Oct1 HelaGSE14283 17779606 17779647 41 0
Oct1 HelaGSE14283 17781419 17781447 28 0
P300 T30-glioblastomaGSE21026 17747523 17748312 789 0
RARG MCF7GSE15244 17726574 17726921 347 0
Rb GrowingGSE19898 17755915 17756094 179 0
Rb QuiescentGSE19898 17755908 17756194 286 0
Sox2 hESGSE18292 17740794 17741048 254 0
TAF k562GSE8489 17726249 17728637 2388 0
TFAP2C MCF7GSE21234 17755460 17755738 278 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2863 mRNA STAM chr10 17726129 17797913 2681 EST chr10 17727331 17730012 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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