Annotation Detail for CDK5RAP3
Basic Information Top
| Gene Symbol: | CDK5RAP3 ( C53,HSF-27,IC53,LZAP,MST016,OK/SW-cl.114 ) |
|---|---|
| Gene Full Name: | CDK5 regulatory subunit associated protein 3 |
| Band: | 17q21.32 |
| Quick Links | Entrez ID:80279; OMIM: 608202; Uniprot ID:CK5P3_HUMAN; ENSEMBL ID: ENSG00000108465; HGNC ID: 18673 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 51 | Phosphoserine | HMM predict |
| 91 | Phosphoserine(CAMK2) | HMM predict |
| 144 | Phosphoserine(CK2) | HMM predict |
| 218 | Phosphoserine(CDK) | HMM predict |
| 218 | Phosphoserine(IKK) | HMM predict |
| 235 | N-linked | HMM predict |
| 372 | Phosphoserine(CK1) | HMM predict |
| 372 | Phosphoserine(CK2) | HMM predict |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 945 | Unknown | pSILAC | miR-155 | CDK5RAP3 | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000108465 | n_a | n_a | n_a | "epithelium, lymphoblast, lymphocyte, leukocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" |