Annotation Detail for TRABD
Basic Information Top
| Gene Symbol: | TRABD ( LP6054,MGC110928,PP2447 ) |
|---|---|
| Gene Full Name: | TraB domain containing |
| Band: | 22q13.33 |
| Quick Links | Entrez ID:80305; OMIM: NA; Uniprot ID:TRABD_HUMAN; ENSEMBL ID: ENSG00000170638; HGNC ID: 28805 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 76 | Phosphotyrosine(Jak) | HMM predict |
| 84 | Phosphoserine(ATM) | HMM predict |
| 94 | Phosphothreonine(PKC) | HMM predict |
| 262 | Phosphotyrosine(Syk) | HMM predict |
| 330 | Phosphoserine(PKG) | HMM predict |
| 355 | Phosphoserine(IKK) | HMM predict |
| 355 | Phosphoserine(PKB) | HMM predict |
| 369 | Arginine | HMM predict |
| 370 | Valine | HMM predict |
- RefSeq ID: NM_025204
- Location:chr22 48966486-48980153
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 48964928 | 48965606 | 678 | 1220 |
| ETS1 | Jurkat | GSE17954 | 48965927 | 48966662 | 735 | 192 |
| hScc1 | Bcell | GSE12603 | 48965375 | 48965783 | 408 | 908 |
| p130 | shRbQuiescent | GSE19898 | 48964370 | 48964667 | 297 | 1968 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 48973577 | 48974314 | 737 | 0 |
| CTCF | G2 | GSE9613 | 48976949 | 48977227 | 278 | 0 |
| Myc | K562 | GSE19551 | 48971001 | 48971373 | 372 | 0 |
| PHF8 | HeLa | GSE20725 | 48966005 | 48967065 | 1060 | 0 |
| Pol2 | GM12878 | GSE19551 | 48970604 | 48972417 | 1813 | 0 |
| hScc1 | Bcell | GSE12603 | 48966935 | 48967738 | 803 | 0 |
| hScc1 | Bcell | GSE12603 | 48970174 | 48971156 | 982 | 0 |
| hScc1 | Bcell | GSE12603 | 48974237 | 48975145 | 908 | 0 |
| hScc1 | Bcell | GSE12603 | 48977850 | 48979167 | 1317 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17660 | mRNA | PP2447 | chr22 | 48926816 | 48940484 | 254 | EST | chr22 | 48939960 | 48941134 | Sense/Antisense (SA) pairs | |