Annotation Detail for NCOA4
Basic Information Top
| Gene Symbol: | NCOA4 ( ARA70,DKFZp762E1112,ELE1,PTC3,RFG ) |
|---|---|
| Gene Full Name: | nuclear receptor coactivator 4 |
| Band: | 10q11.22 |
| Quick Links | Entrez ID:8031; OMIM: 601984; Uniprot ID:NCOA4_HUMAN; ENSEMBL ID: ENSG00000138293; HGNC ID: 7671 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 456 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 456 | Phosphoserine. | Swiss-Prot 53.0 |
| 456 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | Phosphoserine(IKK) | HMM predict |
| 214 | Phosphotyrosine(Syk) | HMM predict |
| 237 | Phosphoserine(IKK) | HMM predict |
| 237 | Phosphoserine(ATM) | HMM predict |
| 269 | Phosphotyrosine(EGFR) | HMM predict |
| 307 | Phosphothreonine(CDK) | HMM predict |
| 307 | Phosphothreonine(MAPK) | HMM predict |
| 319 | N-linked | HMM predict |
| 380 | Phosphoserine(IKK) | HMM predict |
| 381 | Phosphothreonine(MAPK) | HMM predict |
| 478 | Phosphothreonine(CDK) | HMM predict |
| 478 | Phosphothreonine(CDC2) | HMM predict |
| 478 | Phosphothreonine(MAPK) | HMM predict |
| 492 | Phosphoserine(CDC2) | HMM predict |
| 525 | Phosphoserine(CDC2) | HMM predict |
| 528 | N-linked | HMM predict |
| 533 | O-linked | HMM predict |
| 550 | Phosphoserine(ATM) | HMM predict |
| 553 | Phosphoserine(CK2) | HMM predict |
| 572 | Phosphoserine(MAPK) | HMM predict |
- RefSeq ID: NM_005437
- Location:chr10 51242372-51260737
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 51239090 | 51240319 | 1229 | 2668 |
| hScc1 | CdLS | GSE12603 | 51241770 | 51242443 | 673 | 266 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 51244164 | 51245226 | 1062 | 0 |
| PHF8 | HeLa | GSE20725 | 51241981 | 51242801 | 820 | 0 |
| RARA | MCF7 | GSE15244 | 51250483 | 51251486 | 1003 | 0 |
| RARG | MCF7 | GSE15244 | 51250555 | 51251343 | 788 | 0 |
| RARG | MCF7 | GSE15244 | 51254777 | 51255526 | 749 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7a | hsa-let-7a-1 | 9 | 19956384 |
| hsa-let-7a | hsa-let-7a-2 | 11 | 19956384 |
| hsa-let-7a | hsa-let-7a-3 | 22 | 19956384 |
| hsa-let-7a* | hsa-let-7a-1 | 9 | 19956384 |
| hsa-let-7a* | hsa-let-7a-3 | 22 | 19956384 |
| hsa-let-7b | hsa-let-7b | 22 | 19956384 |
| hsa-let-7b* | hsa-let-7b | 22 | 19956384 |
| hsa-let-7c | hsa-let-7c | 21 | 19956384 |
| hsa-let-7c* | hsa-let-7c | 21 | 19956384 |
| hsa-let-7d | hsa-let-7d | 9 | 19956384 |
| hsa-let-7d* | hsa-let-7d | 9 | 19956384 |
| hsa-let-7e | hsa-let-7e | 19 | 19956384 |
| hsa-let-7e* | hsa-let-7e | 19 | 19956384 |
| hsa-let-7f | hsa-let-7f-1 | 9 | 19956384 |
| hsa-let-7f | hsa-let-7f-2 | X | 19956384 |
| hsa-let-7f-1* | hsa-let-7f-1 | 9 | 19956384 |
| hsa-let-7f-2* | hsa-let-7f-2 | X | 19956384 |
| hsa-let-7g | hsa-let-7g | 3 | 19956384 |
| hsa-let-7g* | hsa-let-7g | 3 | 19956384 |
| hsa-let-7i | hsa-let-7i | 12 | 19956384 |
| hsa-let-7i* | hsa-let-7i | 12 | 19956384 |
| No data |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3146 | mRNA | NCOA4 | chr10 | 51242372 | 51260738 | 360 | EST | chr10 | 51259054 | 51259590 | Sense/Antisense (SA) pairs | |