Annotation Detail for TET1
Basic Information Top
| Gene Symbol: | TET1 ( CXXC6,FLJ10839,FLJ41442,KIAA1676,LCX,bA119F7.1 ) |
|---|---|
| Gene Full Name: | tet oncogene 1 |
| Band: | 10q21.3 |
| Quick Links | Entrez ID:80312; OMIM: 607790; Uniprot ID:TET1_HUMAN; ENSEMBL ID: ENSG00000138336; HGNC ID: 29484 |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_030625
- Location:chr10 69990418-70123453
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 69980558 | 69980841 | 283 | 9719 |
| CTCF | CD4 | SISSRdata | 69980558 | 69980841 | 283 | 9719 |
| CTCF | Jurkat | GSE12889 | 69980616 | 69980875 | 259 | 9673 |
| H3ac | HepG2 | E | 69989086 | 69989785 | 699 | 983 |
| Myc | K562 | GSE19551 | 69980372 | 69981006 | 634 | 9730 |
| Oct1 | H2O2-Hela | GSE14283 | 69980303 | 69980332 | 29 | 10101 |
| Rb | Growing | GSE19898 | 69980581 | 69980761 | 180 | 9748 |
| TAF | k562 | GSE8489 | 69989158 | 69989821 | 663 | 929 |
| TAFII | hES | GSE17917 | 69989766 | 69990867 | 1101 | 102 |
| hScc1 | Bcell | GSE12603 | 69980495 | 69980886 | 391 | 9728 |
| hScc1 | CdLS | GSE12603 | 69980461 | 69980886 | 425 | 9745 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 69991825 | 69992834 | 1009 | 0 |
| H3ac | HepG2 | E | 69990842 | 69991285 | 443 | 0 |
| H3ac | HepG2 | E | 69991993 | 69993418 | 1425 | 0 |
| H3ac | HepG2 | E | 70028868 | 70029926 | 1058 | 0 |
| KLF4 | hES | GSE17917 | 70029984 | 70030375 | 391 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 70012915 | 70012944 | 29 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 70046695 | 70046733 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 70004222 | 70004250 | 28 | 0 |
| Oct1 | Hela | GSE14283 | 70046696 | 70046725 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 70091839 | 70091872 | 33 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 70061002 | 70061837 | 835 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 70061229 | 70061763 | 534 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 70095910 | 70096768 | 858 | 0 |
| Rb | Senescent | GSE19898 | 70096402 | 70096643 | 241 | 0 |
| STAT1 | HeLa | GSE12782 | 70054686 | 70055990 | 1304 | 0 |
| STAT1 | HeLa | GSE12783 | 70054720 | 70055990 | 1270 | 0 |
| TAF | Hela | GSE8489 | 70066505 | 70066711 | 206 | 0 |
| TAF | k562 | GSE8489 | 69991825 | 69993418 | 1593 | 0 |
| TFAP2C | MCF7 | GSE21234 | 70024141 | 70024554 | 413 | 0 |
| hScc1 | Bcell | GSE12603 | 70029973 | 70030216 | 243 | 0 |
| hScc1 | Bcell | GSE12603 | 70120802 | 70121130 | 328 | 0 |
| hScc1 | CdLS | GSE12603 | 70083889 | 70084069 | 180 | 0 |
| p130 | Quiescent | GSE19898 | 70030037 | 70030508 | 471 | 0 |
| p130 | shRbQuiescent | GSE19898 | 70029601 | 70030438 | 837 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-29a | hsa-mir-29a | 7 | 19850741 |
| hsa-miR-29a* | hsa-mir-29a | 7 | 19850741 |
| hsa-miR-29b | hsa-mir-29b-1 | 7 | 19850741 |
| hsa-miR-29b | hsa-mir-29b-2 | 1 | 19850741 |
| hsa-miR-29b-1* | hsa-mir-29b-1 | 7 | 19850741 |
| hsa-miR-29b-2* | hsa-mir-29b-2 | 1 | 19850741 |
| hsa-miR-29c | hsa-mir-29c | 1 | 19850741 |
| hsa-miR-29c* | hsa-mir-29c | 1 | 19850741 |
| No data |