AutismKB 2.0

Annotation Detail for LRRC27


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:LRRC27 ( - )
Gene Full Name: leucine rich repeat containing 27
Band: 10q26.3
Quick LinksEntrez ID:80313; OMIM: NA; Uniprot ID:LRC27_HUMAN; ENSEMBL ID: ENSG00000148814; HGNC ID: 29346
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
1AcetylmethionineHMM predict
6PhosphoserineHMM predict
7Phosphotyrosine(Syk)HMM predict
7Phosphotyrosine(INSR)HMM predict
7PhosphotyrosineHMM predict
26O-linkedHMM predict
26Phosphoserine(IKK)HMM predict
30Phosphothreonine(CDK)HMM predict
30Phosphothreonine(MAPK)HMM predict
92N-linkedHMM predict
138Phosphothreonine(PKC)HMM predict
176Phosphoserine(CK1)HMM predict
180N-linkedHMM predict
183Phosphoserine(IKK)HMM predict
183O-linkedHMM predict
183Phosphoserine(ATM)HMM predict
193Phosphothreonine(PKC)HMM predict
199Phosphoserine(MAPK)HMM predict
205Phosphoserine(ATM)HMM predict
249Phosphoserine(CK1)HMM predict
312Phosphothreonine(PKA)HMM predict
381Phosphoserine(CK1)HMM predict
389Phosphoserine(PKA)HMM predict
418Phosphoserine(PKG)HMM predict
422Phosphoserine(IKK)HMM predict
529TyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_030626
  • Location:chr10 133995693-134043411
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 133983421 133984284 863 11841
ETS1 JurkatGSE17954 133994919 133996056 1137 206
Fos K562GSE19551 133983497 133984120 623 11885
GABP k562GSE8489 133992933 133993717 784 2369
H3K4me3 colorectalcancer 133993332 133993976 644 2040
H3ac HepG2E 133992933 133993976 1043 2239
H3ac HepG2E 133994735 133995123 388 765
Myc K562GSE19551 133983574 133983966 392 11924
NFkBII GM12892GSE19485 133983099 133984436 1337 11926
PHF8 293TGSE20725 133994715 133996054 1339 309
PHF8 HeLaGSE20725 133994930 133996180 1250 139
RARG MCF7GSE15244 133993254 133993905 651 2114
Rb GrowingGSE19898 133995003 133995151 148 617
Rb QuiescentGSE19898 133994965 133995204 239 609
TAF HelaGSE8489 133992933 133993976 1043 2239
TAF k562GSE8489 133992933 133993905 972 2275
hScc1 BcellGSE12603 133993332 133993509 177 2273
hScc1 BcellGSE12603 133995155 133995601 446 316
p130 SenescentGSE19898 133983616 133984287 671 11742
p130 shRbSenescentGSE19898 133983624 133983970 346 11897
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 134051476 134051695 219 8174
CTCF CD4SISSRdata 134051476 134051695 219 8174
CTCF HelaGSE12889 134051479 134051680 201 8168
CTCF JurkatGSE12889 134051538 134051683 145 8199
H3ac HepG2E 134050244 134051091 847 7256
TFAP2C MCF7GSE21234 134051224 134051707 483 8054
hScc1 BcellGSE12603 134051273 134051631 358 8041
hScc1 CdLSGSE12603 134050699 134051631 932 7754
hScc1 G2GSE9613 134051338 134051631 293 8073
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 134027721 134028261 540 0
CTCF CD4GSE12889 134016207 134016517 310 0
CTCF CD4GSE12889 134024245 134024526 281 0
CTCF CD4GSE12889 134035441 134035556 115 0
CTCF CD4SISSRdata 134016207 134016517 310 0
CTCF CD4SISSRdata 134024245 134024526 281 0
CTCF CD4SISSRdata 134035441 134035556 115 0
CTCF HelaGSE12889 134016195 134016387 192 0
CTCF HelaGSE12889 134024317 134024545 228 0
CTCF JurkatGSE12889 134016226 134016376 150 0
ERG prostate-cancerGSE14092 134027703 134028500 797 0
H3ac HepG2E 133996473 133997453 980 0
H3ac HepG2E 134001849 134002108 259 0
Myc K562GSE19551 134024328 134024557 229 0
Nanog ESGSE20650 134027859 134028115 256 0
Oct4 ESGSE20650 134027848 134028372 524 0
P300 T30-glioblastomaGSE21026 134027462 134028397 935 0
Pol3 K562GSE19551 134027564 134028127 563 0
Rb QuiescentGSE19898 133995833 133995976 143 0
TFAP2C MCF7GSE21234 134016154 134016383 229 0
hScc1 BcellGSE12603 134014954 134016721 1767 0
hScc1 BcellGSE12603 134034527 134035735 1208 0
hScc1 BcellGSE12603 134036082 134036429 347 0
hScc1 CdLSGSE12603 134015309 134016464 1155 0
hScc1 G2GSE9613 134015453 134016752 1299 0
hScc1 G2GSE9613 134035339 134035735 396 0
p130 QuiescentGSE19898 133995670 133995937 267 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved