Annotation Detail for CUL5
Basic Information Top
| Gene Symbol: | CUL5 ( VACM-1,VACM1 ) |
|---|---|
| Gene Full Name: | cullin 5 |
| Band: | 11q22.3 |
| Quick Links | Entrez ID:8065; OMIM: 601741; Uniprot ID:CUL5_HUMAN; ENSEMBL ID: ENSG00000166266; HGNC ID: 2556 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 210 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 372 | Phosphotyrosine | Phospho.ELM 6.0 |
| 724 | Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in NEDD8) (Bysimilarity). | Swiss-Prot 53.0 |
| 729 | Phosphoserine (PKA |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | Phosphoserine(PKG) | HMM predict |
| 144 | N-linked | HMM predict |
| 150 | N-linked | HMM predict |
| 183 | Phosphoserine(PKG) | HMM predict |
| 288 | N-linked | HMM predict |
| 334 | O-linked | HMM predict |
| 335 | Phosphothreonine(CK2) | HMM predict |
| 426 | Phosphothreonine(PKC) | HMM predict |
| 426 | Phosphothreonine(CK2) | HMM predict |
| 470 | Phosphoserine(CK2) | HMM predict |
| 565 | N-linked | HMM predict |
- RefSeq ID: NM_003478
- Location:chr11 107384617-107483693
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Myc | K562 | GSE19551 | 107375750 | 107376005 | 255 | 8740 |
| NRSF | Jurkat | GSE13047 | 107379623 | 107379889 | 266 | 4862 |
| NRSF | Jurkat | SISSRdata | 107379659 | 107379885 | 226 | 4846 |
| NRSF | mAb | Jurkat | 107379048 | 107379696 | 648 | 5246 |
| NRSF-mono | Jurkat | QuESTdata | 107379622 | 107379884 | 262 | 4865 |
| NRSF-poly | Jurkat | QuESTdata | 107379518 | 107380007 | 489 | 4855 |
| Nanog | ES | GSE20650 | 107367747 | 107368364 | 617 | 16562 |
| Nanog | hES | GSE18292 | 107367741 | 107368223 | 482 | 16636 |
| USF1 | HepG2 | E | 107383374 | 107383653 | 279 | 1104 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 107490247 | 107490279 | 32 | 6570 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 107384575 | 107384972 | 397 | 0 |
| CTCF | CD4 | SISSRdata | 107384575 | 107384972 | 397 | 0 |
| FOXA1 | MCF7 | GSE15244 | 107404971 | 107405336 | 365 | 0 |
| H3ac | HepG2 | E | 107385006 | 107386332 | 1326 | 0 |
| KLF4 | hES | GSE17917 | 107414039 | 107414194 | 155 | 0 |
| Myc | K562 | GSE19551 | 107395767 | 107396266 | 499 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 107432092 | 107432119 | 27 | 0 |
| Oct1 | Hela | GSE14283 | 107432080 | 107432118 | 38 | 0 |
| PHF8 | 293T | GSE20725 | 107384495 | 107385750 | 1255 | 0 |
| PHF8 | HeLa | GSE20725 | 107384566 | 107385705 | 1139 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 107384438 | 107385885 | 1447 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 107384480 | 107385991 | 1511 | 0 |
| Rb | Quiescent | GSE19898 | 107384654 | 107384957 | 303 | 0 |
| TAF | Hela | GSE8489 | 107385354 | 107385770 | 416 | 0 |
| USF1 | HepG2 | E | 107384027 | 107386332 | 2305 | 0 |
| hScc1 | Bcell | GSE12603 | 107384312 | 107384922 | 610 | 0 |
| hScc1 | CdLS | GSE12603 | 107384422 | 107384963 | 541 | 0 |
| p130 | Quiescent | GSE19898 | 107384763 | 107385774 | 1011 | 0 |
| p130 | Senescent | GSE19898 | 107384700 | 107385739 | 1039 | 0 |
| p130 | shRbQuiescent | GSE19898 | 107384602 | 107385778 | 1176 | 0 |
| p130 | shRbSenescent | GSE19898 | 107384814 | 107385784 | 970 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5149 | mRNA | CUL5 | chr11 | 107384854 | 107482773 | 342 | EST | chr11 | 107481664 | 107482771 | Sense/Antisense (SA) pairs | |