AutismKB 2.0

Annotation Detail for ARHGAP39


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Basic Information Top
Gene Symbol:ARHGAP39 ( CrGAP,KIAA1688,Vilse )
Gene Full Name: Rho GTPase activating protein 39
Band: 8q24.3
Quick LinksEntrez ID:80728; OMIM: NA; Uniprot ID:RHG39_HUMAN; ENSEMBL ID: ENSG00000147799; HGNC ID: 29351
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
173Phosphoserine.
248Phosphoserine.
366Phosphoserine.
388Phosphoserine.
406Phosphoserine.
407Phosphoserine.
604Phosphoserine.
690Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_025251
  • Location:chr8 145725370-145809695
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 145816830 145817178 348 7309
NRSF pAbJurkat 145820954 145823265 2311 12414
NRSF pAbJurkat 145828502 145828869 367 18990
Rb shRbQuiescentGSE19898 145818228 145818502 274 8670
hScc1 BcellGSE12603 145814809 145815565 756 5492
hScc1 BcellGSE12603 145818931 145819240 309 9390
hScc1 BcellGSE12603 145820716 145823429 2713 12377
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 145771728 145771972 244 0
CTCF CD4GSE12889 145779566 145779784 218 0
CTCF CD4SISSRdata 145771728 145771972 244 0
CTCF CD4SISSRdata 145779566 145779784 218 0
FOXA1 MCF7GSE15244 145728229 145728438 209 0
FOXA1 MCF7GSE15244 145757314 145759048 1734 0
GABP HelaGSE8489 145752789 145754135 1346 0
GATA3 MCF7GSE15244 145757314 145759048 1734 0
H3ac HepG2E 145752789 145753934 1145 0
Myc K562GSE19551 145771590 145772114 524 0
NRSF pAbJurkat 145725957 145727419 1462 0
NRSF pAbJurkat 145731710 145732379 669 0
NRSF pAbJurkat 145732845 145734559 1714 0
NRSF pAbJurkat 145741883 145742553 670 0
NRSF pAbJurkat 145749099 145749785 686 0
NRSF pAbJurkat 145752789 145753171 382 0
NRSF pAbJurkat 145757314 145759048 1734 0
NRSF pAbJurkat 145775592 145776435 843 0
NRSF pAbJurkat 145781363 145782149 786 0
NRSF pAbJurkat 145782741 145783024 283 0
NRSF pAbJurkat 145786842 145787836 994 0
NRSF pAbJurkat 145791748 145792935 1187 0
RARA MCF7GSE15244 145752789 145754135 1346 0
RARA MCF7GSE15244 145757314 145759048 1734 0
RARG MCF7GSE15244 145752789 145754135 1346 0
RARG MCF7GSE15244 145757314 145759048 1734 0
RUNX JurkatGSE17954 145727988 145728082 94 0
RUNX JurkatGSE17954 145797300 145797385 85 0
STAT1 IFNSISSRdata 145751721 145752257 536 0
TAF HelaGSE8489 145757314 145759048 1734 0
hScc1 BcellGSE12603 145726102 145727118 1016 0
hScc1 BcellGSE12603 145730626 145731069 443 0
hScc1 BcellGSE12603 145738270 145738618 348 0
hScc1 BcellGSE12603 145750776 145751560 784 0
hScc1 BcellGSE12603 145775592 145776365 773 0
hScc1 BcellGSE12603 145776781 145777582 801 0
hScc1 BcellGSE12603 145786842 145787472 630 0
hScc1 BcellGSE12603 145791855 145792625 770 0
hScc1 BcellGSE12603 145801478 145802130 652 0
p63 keratinocytesGSE17611 145747377 145747846 469 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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