AutismKB 2.0

Annotation Detail for HMGA2


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Basic Information Top
Gene Symbol:HMGA2 ( BABL,HMGI-C,HMGIC,LIPO,STQTL9 )
Gene Full Name: high mobility group AT-hook 2
Band: 12q14.3
Quick LinksEntrez ID:8091; OMIM: 600698; Uniprot ID:HMGA2_HUMAN; ENSEMBL ID: ENSG00000149948; HGNC ID: 5009
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine.
14Phosphoserine.
40Phosphothreonine.
44Phosphoserine.
105Phosphoserine (By similarity).
Location(AA) Modifications Resource
44Phosphoserine (CDK1)Phospho.ELM 6.0
59Phosphoserine (CDK1)Phospho.ELM 6.0
105Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
12O-linkedHMM predict
14O-linkedHMM predict
29MethylarginineHMM predict
44Phosphoserine(CDC2)HMM predict
46O-linkedHMM predict
49MethylarginineHMM predict
57N-linkedHMM predict
59PhosphoserineHMM predict
59Phosphoserine(CDK)HMM predict
59Phosphoserine(CDC2)HMM predict
77MethylarginineHMM predict
81MethylarginineHMM predict
102Phosphoserine(ATM)HMM predict
102Phosphoserine(CK1)HMM predict
105Phosphoserine(CK2)HMM predict
105PhosphoserineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003483
  • Location:chr12 64504506-64646334
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 64663757 64664050 293 17569
CTCF CD4SISSRdata 64663757 64664050 293 17569
CTCF G2GSE9613 64663672 64664106 434 17555
Myc K562GSE19551 64663653 64663912 259 17448
Sox2 hESGSE18292 64663786 64663995 209 17556
hScc1 BcellGSE12603 64663565 64663997 432 17447
hScc1 CdLSGSE12603 64663601 64664034 433 17483
hScc1 G2GSE9613 64663601 64664034 433 17483
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 64643132 64643381 249 0
FOXA1 DLD1GSE12801 64610036 64610731 695 0
FOXA1 DLD1GSE12801 64628807 64629293 486 0
FOXA1 DLD1GSE12801 64632822 64632957 135 0
H3ac HepG2E 64607332 64607780 448 0
P300 T30-glioblastomaGSE21026 64628146 64629349 1203 0
PAX3-FKHR Rh4GSE19063 64635265 64637154 1889 0
RARG MCF7GSE15244 64616492 64616712 220 0
hScc1 BcellGSE12603 64642850 64643569 719 0
hScc1 CdLSGSE12603 64643132 64643534 402 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7a hsa-let-7a-1 9 18957199
hsa-let-7a hsa-let-7a-2 11 18957199
hsa-let-7a hsa-let-7a-3 22 18957199
hsa-let-7a hsa-let-7a-1 9 18758960
hsa-let-7a hsa-let-7a-2 11 18758960
hsa-let-7a hsa-let-7a-3 22 18758960
hsa-let-7a hsa-let-7a-1 9 18508790
hsa-let-7a hsa-let-7a-2 11 18508790
hsa-let-7a hsa-let-7a-3 22 18508790
hsa-let-7a hsa-let-7a-1 9 18413822
hsa-let-7a hsa-let-7a-2 11 18413822
hsa-let-7a hsa-let-7a-3 22 18413822
hsa-let-7a hsa-let-7a-1 9 18403645
hsa-let-7a hsa-let-7a-2 11 18403645
hsa-let-7a hsa-let-7a-3 22 18403645
hsa-let-7a hsa-let-7a-1 9 18308936
hsa-let-7a hsa-let-7a-2 11 18308936
hsa-let-7a hsa-let-7a-3 22 18308936
hsa-let-7a hsa-let-7a-1 9 17554199
hsa-let-7a hsa-let-7a-2 11 17554199
hsa-let-7a hsa-let-7a-3 22 17554199
hsa-let-7a hsa-let-7a-1 9 17243163
hsa-let-7a hsa-let-7a-2 11 17243163
hsa-let-7a hsa-let-7a-3 22 17243163
hsa-let-7a hsa-let-7a-1 9 20949044
hsa-let-7a hsa-let-7a-2 11 20949044
hsa-let-7a hsa-let-7a-3 22 20949044
hsa-let-7a hsa-let-7a-1 9 19602040
hsa-let-7a hsa-let-7a-2 11 19602040
hsa-let-7a hsa-let-7a-3 22 19602040
hsa-let-7a hsa-let-7a-1 9 19431195
hsa-let-7a hsa-let-7a-2 11 19431195
hsa-let-7a hsa-let-7a-3 22 19431195
hsa-let-7a hsa-let-7a-1 9 19324969
hsa-let-7a hsa-let-7a-2 11 19324969
hsa-let-7a hsa-let-7a-3 22 19324969
hsa-let-7a hsa-let-7a-1 9 19217096
hsa-let-7a hsa-let-7a-2 11 19217096
hsa-let-7a hsa-let-7a-3 22 19217096
hsa-let-7a hsa-let-7a-1 9 19179606
hsa-let-7a hsa-let-7a-2 11 19179606
hsa-let-7a hsa-let-7a-3 22 19179606
hsa-let-7a hsa-let-7a-1 9 19136928
hsa-let-7a hsa-let-7a-2 11 19136928
hsa-let-7a hsa-let-7a-3 22 19136928
hsa-let-7a hsa-let-7a-1 9 18413726
hsa-let-7a hsa-let-7a-2 11 18413726
hsa-let-7a hsa-let-7a-3 22 18413726
hsa-let-7a hsa-let-7a-1 9 18371414
hsa-let-7a hsa-let-7a-2 11 18371414
hsa-let-7a hsa-let-7a-3 22 18371414
hsa-let-7a hsa-let-7a-1 9 18083101
hsa-let-7a hsa-let-7a-2 11 18083101
hsa-let-7a hsa-let-7a-3 22 18083101
hsa-let-7a hsa-let-7a-1 9 17957144
hsa-let-7a hsa-let-7a-2 11 17957144
hsa-let-7a hsa-let-7a-3 22 17957144
hsa-let-7a hsa-let-7a-1 9 17600087
hsa-let-7a hsa-let-7a-2 11 17600087
hsa-let-7a hsa-let-7a-3 22 17600087
hsa-let-7a hsa-let-7a-1 9 17437991
hsa-let-7a hsa-let-7a-2 11 17437991
hsa-let-7a hsa-let-7a-3 22 17437991
hsa-let-7a hsa-let-7a-1 9 17322030
hsa-let-7a hsa-let-7a-2 11 17322030
hsa-let-7a hsa-let-7a-3 22 17322030
hsa-let-7a* hsa-let-7a-1 9 18957199
hsa-let-7a* hsa-let-7a-3 22 18957199
hsa-let-7a* hsa-let-7a-1 9 18758960
hsa-let-7a* hsa-let-7a-3 22 18758960
hsa-let-7a* hsa-let-7a-1 9 18413822
hsa-let-7a* hsa-let-7a-3 22 18413822
hsa-let-7a* hsa-let-7a-1 9 18403645
hsa-let-7a* hsa-let-7a-3 22 18403645
hsa-let-7a* hsa-let-7a-1 9 18308936
hsa-let-7a* hsa-let-7a-3 22 18308936
hsa-let-7a* hsa-let-7a-1 9 17243163
hsa-let-7a* hsa-let-7a-3 22 17243163
hsa-let-7a* hsa-let-7a-1 9 20949044
hsa-let-7a* hsa-let-7a-3 22 20949044
hsa-let-7a* hsa-let-7a-1 9 19602040
hsa-let-7a* hsa-let-7a-3 22 19602040
hsa-let-7a* hsa-let-7a-1 9 19431195
hsa-let-7a* hsa-let-7a-3 22 19431195
hsa-let-7a* hsa-let-7a-1 9 19324969
hsa-let-7a* hsa-let-7a-3 22 19324969
hsa-let-7a* hsa-let-7a-1 9 19217096
hsa-let-7a* hsa-let-7a-3 22 19217096
hsa-let-7a* hsa-let-7a-1 9 19179606
hsa-let-7a* hsa-let-7a-3 22 19179606
hsa-let-7a* hsa-let-7a-1 9 19136928
hsa-let-7a* hsa-let-7a-3 22 19136928
hsa-let-7a* hsa-let-7a-1 9 18413726
hsa-let-7a* hsa-let-7a-3 22 18413726
hsa-let-7a* hsa-let-7a-1 9 18371414
hsa-let-7a* hsa-let-7a-3 22 18371414
hsa-let-7a* hsa-let-7a-1 9 18083101
hsa-let-7a* hsa-let-7a-3 22 18083101
hsa-let-7a* hsa-let-7a-1 9 17957144
hsa-let-7a* hsa-let-7a-3 22 17957144
hsa-let-7a* hsa-let-7a-1 9 17600087
hsa-let-7a* hsa-let-7a-3 22 17600087
hsa-let-7a* hsa-let-7a-1 9 17437991
hsa-let-7a* hsa-let-7a-3 22 17437991
hsa-let-7a* hsa-let-7a-1 9 17322030
hsa-let-7a* hsa-let-7a-3 22 17322030
hsa-let-7b hsa-let-7b 22 20228781
hsa-let-7b hsa-let-7b 22 18957199
hsa-let-7b hsa-let-7b 22 18758960
hsa-let-7b hsa-let-7b 22 18413822
hsa-let-7b hsa-let-7b 22 18403645
hsa-let-7b hsa-let-7b 22 18308936
hsa-let-7b hsa-let-7b 22 17243163
hsa-let-7b hsa-let-7b 22 20949044
hsa-let-7b hsa-let-7b 22 19602040
hsa-let-7b hsa-let-7b 22 19431195
hsa-let-7b hsa-let-7b 22 19324969
hsa-let-7b hsa-let-7b 22 19217096
hsa-let-7b hsa-let-7b 22 19179606
hsa-let-7b hsa-let-7b 22 19136928
hsa-let-7b hsa-let-7b 22 18413726
hsa-let-7b hsa-let-7b 22 18371414
hsa-let-7b hsa-let-7b 22 18083101
hsa-let-7b hsa-let-7b 22 17957144
hsa-let-7b hsa-let-7b 22 17600087
hsa-let-7b hsa-let-7b 22 17437991
hsa-let-7b hsa-let-7b 22 17322030
hsa-let-7b* hsa-let-7b 22 20228781
hsa-let-7b* hsa-let-7b 22 18957199
hsa-let-7b* hsa-let-7b 22 18758960
hsa-let-7b* hsa-let-7b 22 18413822
hsa-let-7b* hsa-let-7b 22 18403645
hsa-let-7b* hsa-let-7b 22 18308936
hsa-let-7b* hsa-let-7b 22 17243163
hsa-let-7b* hsa-let-7b 22 20949044
hsa-let-7b* hsa-let-7b 22 19602040
hsa-let-7b* hsa-let-7b 22 19431195
hsa-let-7b* hsa-let-7b 22 19324969
hsa-let-7b* hsa-let-7b 22 19217096
hsa-let-7b* hsa-let-7b 22 19179606
hsa-let-7b* hsa-let-7b 22 19136928
hsa-let-7b* hsa-let-7b 22 18413726
hsa-let-7b* hsa-let-7b 22 18371414
hsa-let-7b* hsa-let-7b 22 18083101
hsa-let-7b* hsa-let-7b 22 17957144
hsa-let-7b* hsa-let-7b 22 17600087
hsa-let-7b* hsa-let-7b 22 17437991
hsa-let-7b* hsa-let-7b 22 17322030
hsa-let-7c hsa-let-7c 21 18957199
hsa-let-7c hsa-let-7c 21 18758960
hsa-let-7c hsa-let-7c 21 18413822
hsa-let-7c hsa-let-7c 21 18403645
hsa-let-7c hsa-let-7c 21 18308936
hsa-let-7c hsa-let-7c 21 17243163
hsa-let-7c hsa-let-7c 21 20949044
hsa-let-7c hsa-let-7c 21 19602040
hsa-let-7c hsa-let-7c 21 19431195
hsa-let-7c hsa-let-7c 21 19324969
hsa-let-7c hsa-let-7c 21 19217096
hsa-let-7c hsa-let-7c 21 19179606
hsa-let-7c hsa-let-7c 21 19136928
hsa-let-7c hsa-let-7c 21 18413726
hsa-let-7c hsa-let-7c 21 18371414
hsa-let-7c hsa-let-7c 21 18083101
hsa-let-7c hsa-let-7c 21 17957144
hsa-let-7c hsa-let-7c 21 17600087
hsa-let-7c hsa-let-7c 21 17437991
hsa-let-7c hsa-let-7c 21 17322030
hsa-let-7c* hsa-let-7c 21 18957199
hsa-let-7c* hsa-let-7c 21 18758960
hsa-let-7c* hsa-let-7c 21 18413822
hsa-let-7c* hsa-let-7c 21 18403645
hsa-let-7c* hsa-let-7c 21 18308936
hsa-let-7c* hsa-let-7c 21 17243163
hsa-let-7c* hsa-let-7c 21 20949044
hsa-let-7c* hsa-let-7c 21 19602040
hsa-let-7c* hsa-let-7c 21 19431195
hsa-let-7c* hsa-let-7c 21 19324969
hsa-let-7c* hsa-let-7c 21 19217096
hsa-let-7c* hsa-let-7c 21 19179606
hsa-let-7c* hsa-let-7c 21 19136928
hsa-let-7c* hsa-let-7c 21 18413726
hsa-let-7c* hsa-let-7c 21 18371414
hsa-let-7c* hsa-let-7c 21 18083101
hsa-let-7c* hsa-let-7c 21 17957144
hsa-let-7c* hsa-let-7c 21 17600087
hsa-let-7c* hsa-let-7c 21 17437991
hsa-let-7c* hsa-let-7c 21 17322030
hsa-let-7d hsa-let-7d 9 20652617
hsa-let-7d hsa-let-7d 9 20395557
hsa-let-7d hsa-let-7d 9 18957199
hsa-let-7d hsa-let-7d 9 18758960
hsa-let-7d hsa-let-7d 9 18413822
hsa-let-7d hsa-let-7d 9 18403645
hsa-let-7d hsa-let-7d 9 18308936
hsa-let-7d hsa-let-7d 9 17243163
hsa-let-7d hsa-let-7d 9 20949044
hsa-let-7d hsa-let-7d 9 19602040
hsa-let-7d hsa-let-7d 9 19431195
hsa-let-7d hsa-let-7d 9 19324969
hsa-let-7d hsa-let-7d 9 19217096
hsa-let-7d hsa-let-7d 9 19179606
hsa-let-7d hsa-let-7d 9 19136928
hsa-let-7d hsa-let-7d 9 18413726
hsa-let-7d hsa-let-7d 9 18371414
hsa-let-7d hsa-let-7d 9 18083101
hsa-let-7d hsa-let-7d 9 17957144
hsa-let-7d hsa-let-7d 9 17600087
hsa-let-7d hsa-let-7d 9 17437991
hsa-let-7d hsa-let-7d 9 17322030
hsa-let-7d* hsa-let-7d 9 20652617
hsa-let-7d* hsa-let-7d 9 20395557
hsa-let-7d* hsa-let-7d 9 18957199
hsa-let-7d* hsa-let-7d 9 18758960
hsa-let-7d* hsa-let-7d 9 18413822
hsa-let-7d* hsa-let-7d 9 18403645
hsa-let-7d* hsa-let-7d 9 18308936
hsa-let-7d* hsa-let-7d 9 17243163
hsa-let-7d* hsa-let-7d 9 20949044
hsa-let-7d* hsa-let-7d 9 19602040
hsa-let-7d* hsa-let-7d 9 19431195
hsa-let-7d* hsa-let-7d 9 19324969
hsa-let-7d* hsa-let-7d 9 19217096
hsa-let-7d* hsa-let-7d 9 19179606
hsa-let-7d* hsa-let-7d 9 19136928
hsa-let-7d* hsa-let-7d 9 18413726
hsa-let-7d* hsa-let-7d 9 18371414
hsa-let-7d* hsa-let-7d 9 18083101
hsa-let-7d* hsa-let-7d 9 17957144
hsa-let-7d* hsa-let-7d 9 17600087
hsa-let-7d* hsa-let-7d 9 17437991
hsa-let-7d* hsa-let-7d 9 17322030
hsa-let-7e hsa-let-7e 19 21213367
hsa-let-7e hsa-let-7e 19 18957199
hsa-let-7e hsa-let-7e 19 18758960
hsa-let-7e hsa-let-7e 19 18413822
hsa-let-7e hsa-let-7e 19 18403645
hsa-let-7e hsa-let-7e 19 18308936
hsa-let-7e hsa-let-7e 19 17243163
hsa-let-7e hsa-let-7e 19 20949044
hsa-let-7e hsa-let-7e 19 19602040
hsa-let-7e hsa-let-7e 19 19431195
hsa-let-7e hsa-let-7e 19 19324969
hsa-let-7e hsa-let-7e 19 19217096
hsa-let-7e hsa-let-7e 19 19179606
hsa-let-7e hsa-let-7e 19 19136928
hsa-let-7e hsa-let-7e 19 18413726
hsa-let-7e hsa-let-7e 19 18371414
hsa-let-7e hsa-let-7e 19 18083101
hsa-let-7e hsa-let-7e 19 17957144
hsa-let-7e hsa-let-7e 19 17600087
hsa-let-7e hsa-let-7e 19 17437991
hsa-let-7e hsa-let-7e 19 17322030
hsa-let-7e* hsa-let-7e 19 21213367
hsa-let-7e* hsa-let-7e 19 18957199
hsa-let-7e* hsa-let-7e 19 18758960
hsa-let-7e* hsa-let-7e 19 18413822
hsa-let-7e* hsa-let-7e 19 18403645
hsa-let-7e* hsa-let-7e 19 18308936
hsa-let-7e* hsa-let-7e 19 17243163
hsa-let-7e* hsa-let-7e 19 20949044
hsa-let-7e* hsa-let-7e 19 19602040
hsa-let-7e* hsa-let-7e 19 19431195
hsa-let-7e* hsa-let-7e 19 19324969
hsa-let-7e* hsa-let-7e 19 19217096
hsa-let-7e* hsa-let-7e 19 19179606
hsa-let-7e* hsa-let-7e 19 19136928
hsa-let-7e* hsa-let-7e 19 18413726
hsa-let-7e* hsa-let-7e 19 18371414
hsa-let-7e* hsa-let-7e 19 18083101
hsa-let-7e* hsa-let-7e 19 17957144
hsa-let-7e* hsa-let-7e 19 17600087
hsa-let-7e* hsa-let-7e 19 17437991
hsa-let-7e* hsa-let-7e 19 17322030
hsa-let-7f hsa-let-7f-1 9 18957199
hsa-let-7f hsa-let-7f-2 X 18957199
hsa-let-7f hsa-let-7f-1 9 18758960
hsa-let-7f hsa-let-7f-2 X 18758960
hsa-let-7f hsa-let-7f-1 9 18413822
hsa-let-7f hsa-let-7f-2 X 18413822
hsa-let-7f hsa-let-7f-1 9 18403645
hsa-let-7f hsa-let-7f-2 X 18403645
hsa-let-7f hsa-let-7f-1 9 18308936
hsa-let-7f hsa-let-7f-2 X 18308936
hsa-let-7f hsa-let-7f-1 9 17243163
hsa-let-7f hsa-let-7f-2 X 17243163
hsa-let-7f hsa-let-7f-1 9 20949044
hsa-let-7f hsa-let-7f-2 X 20949044
hsa-let-7f hsa-let-7f-1 9 19602040
hsa-let-7f hsa-let-7f-2 X 19602040
hsa-let-7f hsa-let-7f-1 9 19431195
hsa-let-7f hsa-let-7f-2 X 19431195
hsa-let-7f hsa-let-7f-1 9 19324969
hsa-let-7f hsa-let-7f-2 X 19324969
hsa-let-7f hsa-let-7f-1 9 19217096
hsa-let-7f hsa-let-7f-2 X 19217096
hsa-let-7f hsa-let-7f-1 9 19179606
hsa-let-7f hsa-let-7f-2 X 19179606
hsa-let-7f hsa-let-7f-1 9 19136928
hsa-let-7f hsa-let-7f-2 X 19136928
hsa-let-7f hsa-let-7f-1 9 18413726
hsa-let-7f hsa-let-7f-2 X 18413726
hsa-let-7f hsa-let-7f-1 9 18371414
hsa-let-7f hsa-let-7f-2 X 18371414
hsa-let-7f hsa-let-7f-1 9 18083101
hsa-let-7f hsa-let-7f-2 X 18083101
hsa-let-7f hsa-let-7f-1 9 17957144
hsa-let-7f hsa-let-7f-2 X 17957144
hsa-let-7f hsa-let-7f-1 9 17600087
hsa-let-7f hsa-let-7f-2 X 17600087
hsa-let-7f hsa-let-7f-1 9 17437991
hsa-let-7f hsa-let-7f-2 X 17437991
hsa-let-7f hsa-let-7f-1 9 17322030
hsa-let-7f hsa-let-7f-2 X 17322030
hsa-let-7f-1* hsa-let-7f-1 9 18957199
hsa-let-7f-1* hsa-let-7f-1 9 18758960
hsa-let-7f-1* hsa-let-7f-1 9 18413822
hsa-let-7f-1* hsa-let-7f-1 9 18403645
hsa-let-7f-1* hsa-let-7f-1 9 18308936
hsa-let-7f-1* hsa-let-7f-1 9 17243163
hsa-let-7f-1* hsa-let-7f-1 9 20949044
hsa-let-7f-1* hsa-let-7f-1 9 19602040
hsa-let-7f-1* hsa-let-7f-1 9 19431195
hsa-let-7f-1* hsa-let-7f-1 9 19324969
hsa-let-7f-1* hsa-let-7f-1 9 19217096
hsa-let-7f-1* hsa-let-7f-1 9 19179606
hsa-let-7f-1* hsa-let-7f-1 9 19136928
hsa-let-7f-1* hsa-let-7f-1 9 18413726
hsa-let-7f-1* hsa-let-7f-1 9 18371414
hsa-let-7f-1* hsa-let-7f-1 9 18083101
hsa-let-7f-1* hsa-let-7f-1 9 17957144
hsa-let-7f-1* hsa-let-7f-1 9 17600087
hsa-let-7f-1* hsa-let-7f-1 9 17437991
hsa-let-7f-1* hsa-let-7f-1 9 17322030
hsa-let-7f-2* hsa-let-7f-2 X 18957199
hsa-let-7f-2* hsa-let-7f-2 X 18758960
hsa-let-7f-2* hsa-let-7f-2 X 18413822
hsa-let-7f-2* hsa-let-7f-2 X 18403645
hsa-let-7f-2* hsa-let-7f-2 X 18308936
hsa-let-7f-2* hsa-let-7f-2 X 17243163
hsa-let-7f-2* hsa-let-7f-2 X 20949044
hsa-let-7f-2* hsa-let-7f-2 X 19602040
hsa-let-7f-2* hsa-let-7f-2 X 19431195
hsa-let-7f-2* hsa-let-7f-2 X 19324969
hsa-let-7f-2* hsa-let-7f-2 X 19217096
hsa-let-7f-2* hsa-let-7f-2 X 19179606
hsa-let-7f-2* hsa-let-7f-2 X 19136928
hsa-let-7f-2* hsa-let-7f-2 X 18413726
hsa-let-7f-2* hsa-let-7f-2 X 18371414
hsa-let-7f-2* hsa-let-7f-2 X 18083101
hsa-let-7f-2* hsa-let-7f-2 X 17957144
hsa-let-7f-2* hsa-let-7f-2 X 17600087
hsa-let-7f-2* hsa-let-7f-2 X 17437991
hsa-let-7f-2* hsa-let-7f-2 X 17322030
hsa-let-7g hsa-let-7g 3 18957199
hsa-let-7g hsa-let-7g 3 18758960
hsa-let-7g hsa-let-7g 3 18413822
hsa-let-7g hsa-let-7g 3 18403645
hsa-let-7g hsa-let-7g 3 18308936
hsa-let-7g hsa-let-7g 3 17243163
hsa-let-7g hsa-let-7g 3 20949044
hsa-let-7g hsa-let-7g 3 19602040
hsa-let-7g hsa-let-7g 3 19431195
hsa-let-7g hsa-let-7g 3 19324969
hsa-let-7g hsa-let-7g 3 19217096
hsa-let-7g hsa-let-7g 3 19179606
hsa-let-7g hsa-let-7g 3 19136928
hsa-let-7g hsa-let-7g 3 18413726
hsa-let-7g hsa-let-7g 3 18371414
hsa-let-7g hsa-let-7g 3 18083101
hsa-let-7g hsa-let-7g 3 17957144
hsa-let-7g hsa-let-7g 3 17600087
hsa-let-7g hsa-let-7g 3 17437991
hsa-let-7g hsa-let-7g 3 17322030
hsa-let-7g* hsa-let-7g 3 18957199
hsa-let-7g* hsa-let-7g 3 18758960
hsa-let-7g* hsa-let-7g 3 18413822
hsa-let-7g* hsa-let-7g 3 18403645
hsa-let-7g* hsa-let-7g 3 18308936
hsa-let-7g* hsa-let-7g 3 17243163
hsa-let-7g* hsa-let-7g 3 20949044
hsa-let-7g* hsa-let-7g 3 19602040
hsa-let-7g* hsa-let-7g 3 19431195
hsa-let-7g* hsa-let-7g 3 19324969
hsa-let-7g* hsa-let-7g 3 19217096
hsa-let-7g* hsa-let-7g 3 19179606
hsa-let-7g* hsa-let-7g 3 19136928
hsa-let-7g* hsa-let-7g 3 18413726
hsa-let-7g* hsa-let-7g 3 18371414
hsa-let-7g* hsa-let-7g 3 18083101
hsa-let-7g* hsa-let-7g 3 17957144
hsa-let-7g* hsa-let-7g 3 17600087
hsa-let-7g* hsa-let-7g 3 17437991
hsa-let-7g* hsa-let-7g 3 17322030
hsa-let-7i hsa-let-7i 12 18957199
hsa-let-7i hsa-let-7i 12 18758960
hsa-let-7i hsa-let-7i 12 18413822
hsa-let-7i hsa-let-7i 12 18403645
hsa-let-7i hsa-let-7i 12 18308936
hsa-let-7i hsa-let-7i 12 17243163
hsa-let-7i hsa-let-7i 12 20949044
hsa-let-7i hsa-let-7i 12 19602040
hsa-let-7i hsa-let-7i 12 19431195
hsa-let-7i hsa-let-7i 12 19324969
hsa-let-7i hsa-let-7i 12 19217096
hsa-let-7i hsa-let-7i 12 19179606
hsa-let-7i hsa-let-7i 12 19136928
hsa-let-7i hsa-let-7i 12 18413726
hsa-let-7i hsa-let-7i 12 18371414
hsa-let-7i hsa-let-7i 12 18083101
hsa-let-7i hsa-let-7i 12 17957144
hsa-let-7i hsa-let-7i 12 17600087
hsa-let-7i hsa-let-7i 12 17437991
hsa-let-7i hsa-let-7i 12 17322030
hsa-let-7i* hsa-let-7i 12 18957199
hsa-let-7i* hsa-let-7i 12 18758960
hsa-let-7i* hsa-let-7i 12 18413822
hsa-let-7i* hsa-let-7i 12 18403645
hsa-let-7i* hsa-let-7i 12 18308936
hsa-let-7i* hsa-let-7i 12 17243163
hsa-let-7i* hsa-let-7i 12 20949044
hsa-let-7i* hsa-let-7i 12 19602040
hsa-let-7i* hsa-let-7i 12 19431195
hsa-let-7i* hsa-let-7i 12 19324969
hsa-let-7i* hsa-let-7i 12 19217096
hsa-let-7i* hsa-let-7i 12 19179606
hsa-let-7i* hsa-let-7i 12 19136928
hsa-let-7i* hsa-let-7i 12 18413726
hsa-let-7i* hsa-let-7i 12 18371414
hsa-let-7i* hsa-let-7i 12 18083101
hsa-let-7i* hsa-let-7i 12 17957144
hsa-let-7i* hsa-let-7i 12 17600087
hsa-let-7i* hsa-let-7i 12 17437991
hsa-let-7i* hsa-let-7i 12 17322030
hsa-miR-125a-3p hsa-mir-125a 19 21213367
hsa-miR-125b hsa-mir-125b-1 11 17563749
hsa-miR-125b hsa-mir-125b-2 21 17563749
hsa-miR-143 hsa-mir-143 5 18508790
hsa-miR-143* hsa-mir-143 5 18508790
hsa-miR-145 hsa-mir-145 5 18508790
hsa-miR-145* hsa-mir-145 5 18508790
hsa-miR-150 hsa-mir-150 19 18508790
hsa-miR-150* hsa-mir-150 19 18508790
hsa-miR-182 hsa-mir-182 7 18508790
hsa-miR-182 hsa-mir-182 7 17976522
hsa-miR-182* hsa-mir-182 7 18508790
hsa-miR-182* hsa-mir-182 7 17976522
hsa-miR-183 hsa-mir-183 7 17976522
hsa-miR-183* hsa-mir-183 7 17976522
hsa-miR-190 hsa-mir-190 15 17976522
hsa-miR-196a hsa-mir-196a-1 17 19169275
hsa-miR-196a hsa-mir-196a-2 12 19169275
hsa-miR-196a* hsa-mir-196a-2 12 19169275
hsa-miR-196b hsa-mir-196b 7 20058197
hsa-miR-197 hsa-mir-197 1 17243163
hsa-miR-21 hsa-mir-21 17 17243163
hsa-miR-21* hsa-mir-21 17 17243163
hsa-miR-223 hsa-mir-223 X 18508790
hsa-miR-223* hsa-mir-223 X 18508790
hsa-miR-23a hsa-mir-23a 19 20652617
hsa-miR-23a* hsa-mir-23a 19 20652617
hsa-miR-23b hsa-mir-23b 9 17243163
hsa-miR-23b* hsa-mir-23b 9 17243163
hsa-miR-26a hsa-mir-26a-1 3 20652617
hsa-miR-26a hsa-mir-26a-2 12 20652617
hsa-miR-26a hsa-mir-26a-1 3 17563749
hsa-miR-26a hsa-mir-26a-2 12 17563749
hsa-miR-26b hsa-mir-26b 2 18508790
hsa-miR-26b* hsa-mir-26b 2 18508790
hsa-miR-29a hsa-mir-29a 7 19169275
hsa-miR-29a* hsa-mir-29a 7 19169275
hsa-miR-29b hsa-mir-29b-1 7 17243163
hsa-miR-29b hsa-mir-29b-2 1 17243163
hsa-miR-30a hsa-mir-30a 6 20652617
hsa-miR-30a* hsa-mir-30a 6 20652617
hsa-miR-30b hsa-mir-30b 8 18508790
hsa-miR-30b* hsa-mir-30b 8 18508790
hsa-miR-30c hsa-mir-30c-2 6 18508790
hsa-miR-30c hsa-mir-30c-1 1 18508790
hsa-miR-30d hsa-mir-30d 8 17563749
hsa-miR-30d* hsa-mir-30d 8 17563749
hsa-miR-31 hsa-mir-31 9 17976522
hsa-miR-31* hsa-mir-31 9 17976522
hsa-miR-331-3p hsa-mir-331 12 19169275
hsa-miR-331-5p hsa-mir-331 12 19169275
hsa-miR-33b hsa-mir-33b 17 18803879
hsa-miR-33b* hsa-mir-33b 17 18803879
hsa-miR-342-3p hsa-mir-342 14 18508790
hsa-miR-342-5p hsa-mir-342 14 18508790
hsa-miR-34a hsa-mir-34a 1 17976522
hsa-miR-34a hsa-mir-34a 1 17554199
hsa-miR-34a hsa-mir-34a 1 18803879
hsa-miR-34a hsa-mir-34a 1 19461653
hsa-miR-34a* hsa-mir-34a 1 17976522
hsa-miR-34a* hsa-mir-34a 1 17554199
hsa-miR-34a* hsa-mir-34a 1 18803879
hsa-miR-34a* hsa-mir-34a 1 19461653
hsa-miR-34b hsa-mir-34b 11 18803879
hsa-miR-34b hsa-mir-34b 11 19461653
hsa-miR-34b* hsa-mir-34b 11 18803879
hsa-miR-34b* hsa-mir-34b 11 19461653
hsa-miR-34c-3p hsa-mir-34c 11 18803879
hsa-miR-34c-3p hsa-mir-34c 11 19461653
hsa-miR-34c-5p hsa-mir-34c 11 18803879
hsa-miR-34c-5p hsa-mir-34c 11 19461653
hsa-miR-370 hsa-mir-370 14 19179606
hsa-miR-98 hsa-mir-98 X 17222355
hsa-miR-99b hsa-mir-99b 19 21213367
hsa-miR-99b* hsa-mir-99b 19 21213367
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
102 mRNA cleavage TRUE let-7 HMGA2 Luciferase assay 17437991
114 Unknown TRUE let-7g HMGA2 Luciferase assay 18413726
714 mRNA cleavage TRUE miR-98 HMGA2 n_a 17222355
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000149948 adult and embryonic CNS neuronal differentiation up regulated n_a "malignant tumour, sarcoma"
ENSG00000149948 n_a end of embryonic development up regulated n_a "malignant tumour, sarcoma"
ENSG00000149948 n_a n_a n_a n_a "malignant tumour, sarcoma"
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6243 mRNA HMGA2 chr12 64503703 64537563 233 mRNA chr12 64535993 64562088Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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