AutismKB 2.0

Annotation Detail for C1orf21


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Basic Information Top
Gene Symbol:C1orf21 ( PIG13 )
Gene Full Name: chromosome 1 open reading frame 21
Band: 1q25.3
Quick LinksEntrez ID:81563; OMIM: NA; Uniprot ID:CA021_HUMAN; ENSEMBL ID: ENSG00000116667; HGNC ID: 15494
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
95Phosphoserine.
115Phosphoserine.
Location(AA) Modifications Resource
115Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
24Phosphotyrosine(INSR)HMM predict
44Phosphotyrosine(INSR)HMM predict
75Phosphothreonine(PKC)HMM predict
95Phosphoserine(ATM)HMM predict
107IsoleucineHMM predict
113Phosphotyrosine(INSR)HMM predict
115Phosphoserine(CK2)HMM predict
115Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_030806
  • Location:chr1 182622772-182864777
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 182622310 182622752 442 242
ER MCF7GSE19013 182608849 182609420 571 13638
Nanog hESGSE18292 182619701 182620214 513 2815
Oct1 H2O2-HelaGSE14283 182613595 182613631 36 9160
Oct1 HelaGSE14283 182610829 182610877 48 11920
Oct1 HelaGSE14283 182613590 182613634 44 9161
RARA MCF7GSE15244 182614242 182615467 1225 7918
Rb SenescentGSE19898 182622511 182622946 435 44
hScc1 BcellGSE12603 182622310 182622827 517 204
p130 shRbSenescentGSE19898 182622289 182622542 253 357
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 182868197 182869031 834 3837
FoxA1 MCF7MACSdata 182876840 182876986 146 12136
Oct1 H2O2-HelaGSE14283 182882126 182882159 33 17365
Oct1 HelaGSE14283 182882126 182882156 30 17364
RNAII Tamoxifen-MCF7GSE14664 182880614 182880656 42 15858
TFAP2C MCF7GSE21234 182865505 182865911 406 931
hScc1 BcellGSE12603 182870870 182871348 478 6332
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 182799094 182799285 191 0
ER E2-MCF7GSE14664 182662273 182662309 36 0
ER E2-MCF7GSE14664 182701339 182701379 40 0
ER Fulvestrant-MCF7GSE14664 182623507 182623540 33 0
ER MCF7GSE19013 182718647 182719591 944 0
ER MCF7GSE19013 182783302 182784142 840 0
ER MCF7GSE19013 182862237 182863250 1013 0
FOXA1 MCF7GSE15244 182643688 182645167 1479 0
FOXA1 MCF7GSE15244 182661331 182662231 900 0
FOXA1 MCF7GSE15244 182857924 182858614 690 0
FoxA1 MCF7MACSdata 182654346 182654576 230 0
H3K4me3 colorectalcancer 182623995 182624481 486 0
Myc K562GSE19551 182701499 182701901 402 0
Oct1 H2O2-HelaGSE14283 182628251 182628278 27 0
Oct1 H2O2-HelaGSE14283 182646391 182646421 30 0
Oct1 H2O2-HelaGSE14283 182675542 182675572 30 0
Oct1 H2O2-HelaGSE14283 182677760 182677799 39 0
Oct1 H2O2-HelaGSE14283 182785134 182785166 32 0
Oct1 HelaGSE14283 182628248 182628278 30 0
Oct1 HelaGSE14283 182674872 182674902 30 0
Oct1 HelaGSE14283 182675541 182675574 33 0
Oct1 HelaGSE14283 182677768 182677799 31 0
Oct1 HelaGSE14283 182719168 182719200 32 0
Oct1 HelaGSE14283 182740046 182740077 31 0
Oct1 HelaGSE14283 182740262 182740303 41 0
Oct1 HelaGSE14283 182741147 182741200 53 0
Oct1 HelaGSE14283 182754840 182754878 38 0
Oct1 HelaGSE14283 182785133 182785176 43 0
Oct1 HelaGSE14283 182791532 182791599 67 0
Oct1 HelaGSE14283 182835756 182835794 38 0
Oct4 hESGSE17917 182733780 182734060 280 0
Oct4 hESGSE17917 182810499 182810744 245 0
Oct4 hESGSE21916 182733583 182734210 627 0
P300 T30-glioblastomaGSE21026 182643692 182644251 559 0
P300 T30-glioblastomaGSE21026 182719984 182720931 947 0
RARA MCF7GSE15244 182643688 182644891 1203 0
RARA MCF7GSE15244 182661331 182662267 936 0
RARA MCF7GSE15244 182718198 182719642 1444 0
RARA MCF7GSE15244 182752590 182753370 780 0
RARA MCF7GSE15244 182802497 182803598 1101 0
RARA MCF7GSE15244 182825922 182826565 643 0
RARA MCF7GSE15244 182847403 182848175 772 0
RARA MCF7GSE15244 182857810 182858692 882 0
RARG MCF7GSE15244 182661331 182662303 972 0
RARG MCF7GSE15244 182718495 182719575 1080 0
RARG MCF7GSE15244 182802036 182803598 1562 0
RARG MCF7GSE15244 182857671 182858581 910 0
TAF k562GSE8489 182746872 182747372 500 0
TAF k562GSE8489 182747764 182748332 568 0
TFAP2C MCF7GSE21234 182628750 182629267 517 0
TFAP2C MCF7GSE21234 182644190 182644834 644 0
TFAP2C MCF7GSE21234 182654108 182654682 574 0
TFAP2C MCF7GSE21234 182725684 182726167 483 0
TFAP2C MCF7GSE21234 182791399 182791869 470 0
hScc1 BcellGSE12603 182768721 182768943 222 0
hScc1 CdLSGSE12603 182799019 182799476 457 0
p130 QuiescentGSE19898 182622689 182622936 247 0
p63 keratinocytesGSE17611 182847785 182848600 815 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2052 mRNA C1orf21 chr1 181326293 181332157 492 EST chr1 181330332 181330824Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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