Annotation Detail for NIPA2
Basic Information Top
| Gene Symbol: | NIPA2 ( MGC5466 ) |
|---|---|
| Gene Full Name: | non imprinted in Prader-Willi/Angelman syndrome 2 |
| Band: | 15q11.2 |
| Quick Links | Entrez ID:81614; OMIM: 608146; Uniprot ID:NIPA2_HUMAN; ENSEMBL ID: ENSG00000140157; HGNC ID: 17044 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 86 | O-linked | HMM predict |
| 258 | O-linked | HMM predict |
| 349 | N-linked | HMM predict |
| 354 | N-linked | HMM predict |
- RefSeq ID: NM_001008860
- Location:chr15 20556789-20585848
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Rb | Quiescent | GSE19898 | 20585919 | 20586163 | 244 | 193 |
| p130 | Quiescent | GSE19898 | 20585881 | 20586175 | 294 | 180 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 20585275 | 20586233 | 958 | 0 |
| H3K4me3 | colorectal | cancer | 20584575 | 20585303 | 728 | 0 |
| H3ac | HepG2 | E | 20584648 | 20585572 | 924 | 0 |
| PHF8 | 293T | GSE20725 | 20585502 | 20586110 | 608 | 0 |
| PHF8 | HeLa | GSE20725 | 20585080 | 20586378 | 1298 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 20585087 | 20586246 | 1159 | 0 |
| TAF | Hela | GSE8489 | 20561624 | 20561852 | 228 | 0 |
| TAF | Hela | GSE8489 | 20584794 | 20585616 | 822 | 0 |
| hScc1 | Bcell | GSE12603 | 20585453 | 20586105 | 652 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8503 | mRNA | CYFIP1 | chr15 | 20507195 | 20557384 | 595 | mRNA | NIPA2 | chr15 | 20556789 | 20585849 | Sense/Antisense (SA) pairs |