AutismKB 2.0

Annotation Detail for MADCAM1


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Basic Information Top
Gene Symbol:MADCAM1 ( MACAM1 )
Gene Full Name: mucosal vascular addressin cell adhesion molecule 1
Band: 19p13.3
Quick LinksEntrez ID:8174; OMIM: 102670; Uniprot ID:MADCA_HUMAN; ENSEMBL ID: ENSG00000099866; HGNC ID: 6765
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
83N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
83N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
242N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
85Phosphoserine(CAMK2)HMM predict
91Phosphothreonine(PKC)HMM predict
121Phosphoserine(MAPK)HMM predict
121Phosphoserine(CDC2)HMM predict
226Phosphoserine(CDC2)HMM predict
226Phosphoserine(IKK)HMM predict
229Phosphoserine(MAPK)HMM predict
229Phosphoserine(ATM)HMM predict
229Phosphoserine(CDC2)HMM predict
229O-linkedHMM predict
235O-linkedHMM predict
235O-linkedHMM predict
237O-linkedHMM predict
237Phosphoserine(MAPK)HMM predict
237Phosphoserine(CDC2)HMM predict
237Phosphoserine(CDK)HMM predict
237Phosphoserine(IKK)HMM predict
242N-linkedHMM predict
243O-linkedHMM predict
243O-linkedHMM predict
245Phosphoserine(IKK)HMM predict
245Phosphoserine(CDC2)HMM predict
245O-linkedHMM predict
248Phosphoserine(ATM)HMM predict
248Phosphoserine(IKK)HMM predict
252O-linkedHMM predict
253Phosphoserine(CDC2)HMM predict
253Phosphoserine(MAPK)HMM predict
253Phosphoserine(IKK)HMM predict
253Phosphoserine(CDK)HMM predict
253O-linkedHMM predict
256Phosphoserine(ATM)HMM predict
256Phosphoserine(IKK)HMM predict
261Phosphoserine(IKK)HMM predict
261O-linkedHMM predict
268PhosphothreonineHMM predict
269O-linkedHMM predict
269Phosphoserine(IKK)HMM predict
276PhosphothreonineHMM predict
277O-linkedHMM predict
277Phosphoserine(IKK)HMM predict
283O-linkedHMM predict
285Phosphoserine(CDK)HMM predict
285Phosphoserine(CDC2)HMM predict
285O-linkedHMM predict
285Phosphoserine(IKK)HMM predict
285Phosphoserine(MAPK)HMM predict
293Phosphoserine(CDC2)HMM predict
293O-linkedHMM predict
302Phosphoserine(IKK)HMM predict
303O-linkedHMM predict
305Phosphothreonine(CDC2)HMM predict
305Phosphothreonine(CDK)HMM predict
308O-linkedHMM predict
308Phosphoserine(CDC2)HMM predict
320Phosphoserine(ATM)HMM predict
320O-linkedHMM predict
320O-linkedHMM predict
389ValineHMM predict
396ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_130760
  • Location:chr19 447489-456341
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 446746 446877 131 678
CTCF CD4SISSRdata 446746 446877 131 678
CTCF JurkatGSE12889 446728 446947 219 652
CTCF G2GSE9613 439540 441036 1496 7202
CTCF G2GSE9613 442522 443206 684 4626
CTCF G2GSE9613 446367 446826 459 893
ETS1 JurkatGSE17954 439482 440588 1106 7455
KLF4 hESGSE17917 446167 446339 172 1237
NFkBII GM10847GSE19485 439527 440658 1131 7397
P300 T30-glioblastomaGSE21026 439377 440390 1013 7606
PHF8 HeLaGSE20725 439372 440783 1411 7412
PHF8 Hs68minusFBSGSE20725 439357 440322 965 7650
Rb GrowingGSE19898 439973 440105 132 7451
Rb SenescentGSE19898 439963 440269 306 7374
Rb shRbSenescenceGSE19898 439923 440135 212 7461
VDR GM10861-UnstimGSE22484 439255 440509 1254 7608
hScc1 BcellGSE12603 439540 441036 1496 7202
hScc1 BcellGSE12603 442486 443034 548 4730
hScc1 BcellGSE12603 446545 446826 281 804
p130 QuiescentGSE19898 440015 440255 240 7355
p130 SenescentGSE19898 439991 440287 296 7351
p130 shRbSenescentGSE19898 439467 439788 321 7862
p130 shRbSenescentGSE19898 439882 440264 382 7417
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 448581 448955 374 0
CTCF G2GSE9613 449818 450191 373 0
hScc1 BcellGSE12603 449251 450264 1013 0
hScc1 BcellGSE12603 452623 452998 375 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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