AutismKB 2.0

Annotation Detail for VANGL1


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Basic Information Top
Gene Symbol:VANGL1 ( KITENIN,LPP2,MGC5338,STB2,STBM2 )
Gene Full Name: vang-like 1 (van gogh, Drosophila)
Band: 1p13.1
Quick LinksEntrez ID:81839; OMIM: 610132; Uniprot ID:VANG1_HUMAN; ENSEMBL ID: ENSG00000173218; HGNC ID: 15512
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
96Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
8Phosphoserine(CK1)HMM predict
33Phosphoserine(CDK)HMM predict
33Phosphoserine(CDC2)HMM predict
33Phosphoserine(PKB)HMM predict
59N-linkedHMM predict
82O-linkedHMM predict
86Phosphoserine(CK1)HMM predict
88Phosphoserine(CK1)HMM predict
88Phosphoserine(ATM)HMM predict
284Phosphotyrosine(Syk)HMM predict
320N-linkedHMM predict
338Phosphoserine(PKG)HMM predict
338Phosphoserine(PKB)HMM predict
338Phosphoserine(PKA)HMM predict
338Phosphoserine(PKA)HMM predict
344SulfotyrosineHMM predict
345Phosphotyrosine(EGFR)HMM predict
345SulfotyrosineHMM predict
417Phosphotyrosine(INSR)HMM predict
436Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_138959
  • Location:chr1 115986096-116042367
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 115984952 115985477 525 882
TAF k562GSE8489 115984920 115985707 787 783
hScc1 BcellGSE12603 115973515 115973772 257 12453
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 115985917 115987194 1277 0
CTCF G2GSE9613 115999139 115999487 348 0
FOXA1 MCF7GSE15244 116014465 116016903 2438 0
H3ac HepG2E 115987231 115987594 363 0
PHF8 HeLaGSE20725 115985566 115987208 1642 0
RARA MCF7GSE15244 116008675 116010380 1705 0
RARA MCF7GSE15244 116020367 116020973 606 0
TAF k562GSE8489 115987085 115987667 582 0
TAF k562GSE8489 115991324 115993365 2041 0
TFAP2C MCF7GSE21234 116009262 116011336 2074 0
hScc1 BcellGSE12603 115986055 115986917 862 0
hScc1 BcellGSE12603 116023454 116023778 324 0
hScc1 CdLSGSE12603 115986777 115987194 417 0
hScc1 CdLSGSE12603 115992936 115993603 667 0
p63 keratinocytesGSE17611 115998927 116000125 1198 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-145 hsa-mir-145 5 20098684
hsa-miR-145* hsa-mir-145 5 20098684
No data
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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