Annotation Detail for HIST1H3D

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Basic Information Top

Gene Symbol:	HIST1H3D ( H3/b,H3FB )
Gene Full Name:	histone cluster 1, H3d
Band:	6p22.2
Quick Links	Entrez ID:8351; OMIM: 602811; Uniprot ID:H31_HUMAN; ENSEMBL ID: ENSG00000197409; HGNC ID: 4767
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
3	Asymmetric dimethylarginine; by PRMT6.
4	Phosphothreonine.
5	N6-acetyllysine; alternate.
5	N6-methyllysine; alternate.
7	Phosphothreonine; by PKC.
9	Citrulline; alternate.
9	Symmetric dimethylarginine; by PRMT5;
10	N6-acetyllysine; alternate.
10	N6-methyllysine; alternate.
10	N6,N6,N6-trimethyllysine; alternate.
10	N6,N6-dimethyllysine; alternate.
11	Phosphoserine.
12	Phosphothreonine; by PKC.
15	N6-acetyllysine.
18	Asymmetric dimethylarginine; by CARM1;
18	Citrulline; alternate.
19	N6-acetyllysine; alternate.
19	N6-methyllysine; alternate.
24	N6-acetyllysine; alternate.
24	N6-methyllysine; alternate.
28	N6-methyllysine; alternate.
28	N6,N6,N6-trimethyllysine; alternate.
28	N6,N6-dimethyllysine; alternate.
28	N6-acetyllysine; alternate.
29	Phosphoserine.
37	N6-methyllysine; alternate.
37	N6,N6,N6-trimethyllysine; alternate.
37	N6,N6-dimethyllysine; alternate.
37	N6-acetyllysine; alternate.
38	N6-methyllysine.
42	Phosphotyrosine.
57	N6-acetyllysine; alternate.
57	N6-methyllysine; alternate.
57	N6,N6,N6-trimethyllysine; alternate.
58	Phosphoserine.
65	N6-methyllysine.
80	N6,N6-dimethyllysine; alternate.
80	N6-acetyllysine; alternate.
80	N6-methyllysine; alternate.
80	N6,N6,N6-trimethyllysine; alternate (By
81	Phosphothreonine.
123	N6-methyllysine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Pol2	GM12878	GSE19551	26128359	26130609	2250	320

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	26128605	26129208	603
E2F4	G0	GSE7516	26128641	26129208	567
LIN9	G0	GSE7516	26128641	26129240	599
LIN9	S	GSE7516	26128865	26129240	375
hScc1	Bcell	GSE12603	26128749	26129100	351
p130	shRbQuiescent	GSE19898	26128583	26129343	760
p130	G0	GSE7516	26128641	26129240	599

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018