AutismKB 2.0

Annotation Detail for RASSF5


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Basic Information Top
Gene Symbol:RASSF5 ( MGC10823,MGC17344,Maxp1,NORE1,NORE1A,NORE1B,RAPL,RASSF3 )
Gene Full Name: Ras association (RalGDS/AF-6) domain family member 5
Band: 1q32.1
Quick LinksEntrez ID:83593; OMIM: 607020; Uniprot ID:RASF5_HUMAN; ENSEMBL ID: ENSG00000136653; HGNC ID: 17609
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
273Phosphothreonine.
352Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
51O-linkedHMM predict
171Phosphoserine(ATM)HMM predict
182Phosphoserine(IKK)HMM predict
186O-linkedHMM predict
188O-linkedHMM predict
207Phosphothreonine(PKC)HMM predict
236Phosphotyrosine(INSR)HMM predict
251Phosphothreonine(PKC)HMM predict
262Phosphotyrosine(Syk)HMM predict
295O-linkedHMM predict
296O-linkedHMM predict
362N-linkedHMM predict
413Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_182664
  • Location:chr1 204747501-204829237
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 204745810 204746216 406 1489
CTCF G2GSE9613 204747017 204747925 908 31
H3K27me3 colorectalcancer 204745766 204746216 450 1511
RARA MCF7GSE15244 204743922 204746216 2294 2433
hScc1 BcellGSE12603 204746079 204746216 137 1354
hScc1 CdLSGSE12603 204745883 204746216 333 1452
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 204784845 204785299 454 0
CTCF CD4GSE12889 204792007 204792206 199 0
CTCF CD4SISSRdata 204784845 204785299 454 0
CTCF CD4SISSRdata 204792007 204792206 199 0
CTCF JurkatGSE12889 204784720 204785145 425 0
CTCF G2GSE9613 204765147 204765340 193 0
CTCF G2GSE9613 204784493 204785124 631 0
FOXA1 MCF7GSE15244 204760801 204761527 726 0
H3K27me3 colorectalcancer 204748885 204749919 1034 0
Myc K562GSE19551 204784571 204785204 633 0
RARA MCF7GSE15244 204760801 204761789 988 0
RARG MCF7GSE15244 204760801 204761934 1133 0
Stat6 IL-4-hr4GSE17850 204760429 204761022 593 0
hScc1 BcellGSE12603 204747209 204747961 752 0
hScc1 BcellGSE12603 204751559 204751931 372 0
hScc1 BcellGSE12603 204784457 204785124 667 0
hScc1 CdLSGSE12603 204784610 204785124 514 0
hScc1 G2GSE9613 204784638 204785124 486 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
305 Unknown MicroArray miR-124 RASSF5 n_a 15685193
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000136653 G1-to-S transition n_a n_a "lymphocyte, muscle cell, leukocyte" "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2235 mRNA RASSF5 chr1 203069273 203151001 16623 EST chr1 203134378 203157594 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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