Annotation Detail for SLC4A9
Basic Information Top
| Gene Symbol: | SLC4A9 ( AE4 ) |
|---|---|
| Gene Full Name: | solute carrier family 4, sodium bicarbonate cotransporter, member 9 |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:83697; OMIM: 610207; Uniprot ID:B3A4_HUMAN; ENSEMBL ID: ENSG00000113073; HGNC ID: 11035 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 162 | Phosphoserine. | |
| 576 | N-linked (GlcNAc...) (Potential). | |
| 600 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 576 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 600 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 36 | Phosphoserine(CDC2) | HMM predict |
| 45 | Phosphoserine(CK1) | HMM predict |
| 77 | Phosphoserine(IKK) | HMM predict |
| 162 | Phosphoserine(PKG) | HMM predict |
| 164 | Phosphoserine(MAPK) | HMM predict |
| 183 | N-linked | HMM predict |
| 195 | Phosphothreonine(CDK) | HMM predict |
| 201 | Phosphoserine | HMM predict |
| 201 | Phosphoserine(PKB) | HMM predict |
| 201 | Phosphoserine(PKA) | HMM predict |
| 201 | Phosphoserine(PKG) | HMM predict |
| 303 | Phosphoserine(PKG) | HMM predict |
| 376 | Phosphoserine(MAPK) | HMM predict |
| 549 | N-linked | HMM predict |
| 576 | N-linked | HMM predict |
| 794 | Phosphoserine(PKG) | HMM predict |
| 930 | Phosphoserine(CDC2) | HMM predict |
| 947 | Phosphoserine(CK1) | HMM predict |
| 960 | Phosphoserine(CK1) | HMM predict |
| 962 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_031467
- Location:chr5 139719978-139734769
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 139717437 | 139717783 | 346 | 2369 |
| CTCF | CD4 | SISSRdata | 139717437 | 139717783 | 346 | 2369 |
| CTCF | G2 | GSE9613 | 139717372 | 139717843 | 471 | 2371 |
| CTCF | G2 | GSE9613 | 139718534 | 139718909 | 375 | 1257 |
| Oct4 | hES | GSE17917 | 139717479 | 139717670 | 191 | 2404 |
| P300 | T30-glioblastoma | GSE21026 | 139717327 | 139718059 | 732 | 2286 |
| hScc1 | Bcell | GSE12603 | 139717466 | 139717843 | 377 | 2324 |
| hScc1 | CdLS | GSE12603 | 139717222 | 139717808 | 586 | 2464 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 139722948 | 139723356 | 408 | 0 |
| CTCF | CD4 | GSE12889 | 139732632 | 139732979 | 347 | 0 |
| CTCF | CD4 | SISSRdata | 139722948 | 139723356 | 408 | 0 |
| CTCF | CD4 | SISSRdata | 139732632 | 139732979 | 347 | 0 |
| CTCF | Jurkat | GSE12889 | 139723027 | 139723249 | 222 | 0 |
| CTCF | G2 | GSE9613 | 139720981 | 139721243 | 262 | 0 |
| CTCF | G2 | GSE9613 | 139722484 | 139723690 | 1206 | 0 |
| CTCF | G2 | GSE9613 | 139724004 | 139724370 | 366 | 0 |
| CTCF | G2 | GSE9613 | 139725828 | 139726088 | 260 | 0 |
| CTCF | G2 | GSE9613 | 139731999 | 139732178 | 179 | 0 |
| CTCF | G2 | GSE9613 | 139732620 | 139732977 | 357 | 0 |
| Myc | K562 | GSE19551 | 139722934 | 139723359 | 425 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 139724142 | 139724173 | 31 | 0 |
| Oct1 | Hela | GSE14283 | 139724144 | 139724176 | 32 | 0 |
| RARA | MCF7 | GSE15244 | 139729093 | 139729463 | 370 | 0 |
| TAF | Hela | GSE8489 | 139729093 | 139729463 | 370 | 0 |
| hScc1 | Bcell | GSE12603 | 139732620 | 139733077 | 457 | 0 |
| hScc1 | CdLS | GSE12603 | 139722794 | 139723377 | 583 | 0 |
| hScc1 | CdLS | GSE12603 | 139732478 | 139733327 | 849 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21555 | mRNA | SLC4A9 | chr5 | 139719978 | 139734770 | 69 | EST | chr5 | 139730664 | 139761136 | Sense/Antisense (SA) pairs | |