AutismKB 2.0

Annotation Detail for RAB34


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Basic Information Top
Gene Symbol:RAB34 ( RAB39,RAH )
Gene Full Name: RAB34, member RAS oncogene family
Band: 17q11.2
Quick LinksEntrez ID:83871; OMIM: 610917; Uniprot ID:RAB34_HUMAN; ENSEMBL ID: ENSG00000109113; HGNC ID: 16519
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
89Effector region (By similarity).
241Phosphoserine.
Location(AA) Modifications Resource
257S-geranylgeranyl cysteine (Potential).Swiss-Prot 53.0
258S-geranylgeranyl cysteine (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
47Phosphothreonine(PKC)HMM predict
176Phosphotyrosine(SRC)HMM predict
257CysteineHMM predict
258CysteineHMM predict
258S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_031934
  • Location:chr17 24065429-24069012
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 24069363 24069659 296 499
H3ac HepG2E 24069495 24070145 650 808
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 24065804 24066291 487 0
PHF8 Hs68plusFBSGSE20725 24067983 24069411 1428 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
hsa-miR-433 hsa-mir-433 14 19531230
hsa-miR-433 hsa-mir-433 14 19531230
hsa-miR-9 hsa-mir-9-1 1 19531230
hsa-miR-9 hsa-mir-9-2 5 19531230
hsa-miR-9 hsa-mir-9-3 15 19531230
hsa-miR-9 hsa-mir-9-1 1 19531230
hsa-miR-9 hsa-mir-9-2 5 19531230
hsa-miR-9 hsa-mir-9-3 15 19531230
hsa-miR-9* hsa-mir-9-1 1 19531230
hsa-miR-9* hsa-mir-9-1 1 19531230
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
995 Unknown pSILAC miR-155 RAB34 down 50-25% 18668040
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000109113 n_a n_a n_a "epithelium, squamous cell, lymphocyte, leukocyte, macrophage, muscle cell" "benign tumour, malignant tumour, carcinoma, sarcoma"
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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