AutismKB 2.0

Annotation Detail for ITFG3


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Basic Information Top
Gene Symbol:ITFG3 ( C16orf9,DKFZp761D0211,FLJ32603,gs19 )
Gene Full Name: integrin alpha FG-GAP repeat containing 3
Band: 16p13.3
Quick LinksEntrez ID:83986; OMIM: NA; Uniprot ID:ITFG3_HUMAN; ENSEMBL ID: ENSG00000167930; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
21Phosphoserine (By similarity).
116N-linked (GlcNAc...) (Potential).
314N-linked (GlcNAc...).
389N-linked (GlcNAc...).
473N-linked (GlcNAc...).
Location(AA) Modifications Resource
21Phosphoserine (By similarity).Swiss-Prot 53.0
116N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
21Phosphoserine(CK1)HMM predict
27N-linkedHMM predict
31N-linkedHMM predict
141O-linkedHMM predict
144N-linkedHMM predict
170O-linkedHMM predict
198N-linkedHMM predict
204Phosphoserine(ATM)HMM predict
204Phosphoserine(CK1)HMM predict
211Phosphoserine(MAPK)HMM predict
314N-linkedHMM predict
359Phosphothreonine(MAPK)HMM predict
389N-linkedHMM predict
473N-linkedHMM predict
535Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032039
  • Location:chr16 224834-256118
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 Hs68minusFBSGSE20725 224144 225473 1329 26
Rb GrowingGSE19898 224470 224852 382 174
Rb QuiescentGSE19898 224433 224838 405 199
Rb SenescentGSE19898 224375 224878 503 208
Rb shRbQuiescentGSE19898 224369 224731 362 285
Rb shRbSenescenceGSE19898 224442 224795 353 216
p130 QuiescentGSE19898 224354 224871 517 222
p130 SenescentGSE19898 224340 224758 418 286
p130 shRbQuiescentGSE19898 224223 224719 496 364
p130 shRbSenescentGSE19898 224313 224819 506 269
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 253991 254263 272 0
CTCF G2GSE9613 254700 255060 360 0
ETS1 JurkatGSE17954 224336 225451 1115 0
TFAP2C MCF7GSE21234 255513 256105 592 0
hScc1 BcellGSE12603 255561 255898 337 0
p130 SenescentGSE19898 229908 230191 283 0
p130 shRbQuiescentGSE19898 224990 225500 510 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9420 mRNA C16orf9 chr16 224801 258971 196 mRNA RGS11 chr16 258310 265915Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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