AutismKB 2.0

Annotation Detail for NCALD


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Basic Information Top
Gene Symbol:NCALD ( MGC33870,MGC74858 )
Gene Full Name: neurocalcin delta
Band: 8q22.3
Quick LinksEntrez ID:83988; OMIM: 606722; Uniprot ID:NCALD_HUMAN; ENSEMBL ID: ENSG00000104490; HGNC ID: 7655
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
115Phosphotyrosine(INSR)HMM predict
144Phosphothreonine(CDC2)HMM predict
165Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040626
  • Location:chr8 102767946-103205737
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 102882494 102883132 638 0
CBP T30-glioblastomaGSE21026 103119110 103119761 651 0
CTCF CD4GSE12889 103114267 103114381 114 0
CTCF CD4SISSRdata 103114267 103114381 114 0
CTCF G2GSE9613 102984403 102984575 172 0
CTCF G2GSE9613 103007375 103007514 139 0
CTCF G2GSE9613 103189347 103189536 189 0
CTCF G2GSE9613 103204830 103205868 1038 0
ER E2-MCF7GSE14664 102891669 102891706 37 0
ER Fulvestrant-MCF7GSE14664 102891669 102891713 44 0
FOXA1 MCF7GSE15244 102873011 102873234 223 0
FOXA1 MCF7GSE15244 102914056 102914498 442 0
FOXA1 MCF7GSE15244 103048885 103049558 673 0
FOXA1 MCF7GSE15244 103073156 103073402 246 0
FOXA1 MCF7GSE15244 103189211 103190021 810 0
Fos K562GSE19551 103062058 103062392 334 0
GABP HelaGSE8489 103199072 103199313 241 0
GATA3 MCF7GSE15244 102917163 102917498 335 0
GATA3 MCF7GSE15244 103029129 103030406 1277 0
H3K27me3 colorectalcancer 103203709 103204646 937 0
KLF4 hESGSE17917 103141989 103142158 169 0
Myc hESGSE17917 103205454 103205926 472 0
NRSF mAbJurkat 103041837 103042533 696 0
NRSF-mono JurkatQuESTdata 103042350 103042563 213 0
NRSF pAbJurkat 103008856 103009294 438 0
NRSF-poly JurkatQuESTdata 103042299 103042592 293 0
Nanog ESGSE20650 103147781 103148207 426 0
Nanog hESGSE18292 103105209 103105390 181 0
Oct1 H2O2-HelaGSE14283 102891680 102891706 26 0
Oct1 H2O2-HelaGSE14283 102949441 102949469 28 0
Oct1 H2O2-HelaGSE14283 103103562 103103593 31 0
Oct1 H2O2-HelaGSE14283 103145169 103145199 30 0
Oct1 H2O2-HelaGSE14283 103173644 103173685 41 0
Oct1 HelaGSE14283 102891675 102891711 36 0
Oct1 HelaGSE14283 102944031 102944063 32 0
Oct1 HelaGSE14283 103103563 103103601 38 0
Oct1 HelaGSE14283 103145168 103145200 32 0
Oct1 HelaGSE14283 103156593 103156705 112 0
Oct1 HelaGSE14283 103173644 103173684 40 0
P300 T0-glioblastomaGSE21026 102913558 102914494 936 0
P300 T30-glioblastomaGSE21026 103061866 103062622 756 0
P300 T30-glioblastomaGSE21026 103119079 103119977 898 0
RARA MCF7GSE15244 102872867 102873234 367 0
RARA MCF7GSE15244 103012675 103012989 314 0
RARA MCF7GSE15244 103077891 103078395 504 0
RARA MCF7GSE15244 103203638 103203948 310 0
RARG MCF7GSE15244 102917163 102917415 252 0
RARG MCF7GSE15244 103012746 103012989 243 0
RNAII Tamoxifen-MCF7GSE14664 103173649 103173697 48 0
TAF HelaGSE8489 103199072 103199313 241 0
TAF k562GSE8489 103090413 103090640 227 0
TFAP2C MCF7GSE21234 103158123 103158642 519 0
VDR GM10861-stimGSE22484 103041484 103042888 1404 0
hScc1 BcellGSE12603 102983923 102984438 515 0
hScc1 BcellGSE12603 103008776 103009137 361 0
hScc1 BcellGSE12603 103204792 103206065 1273 0
hScc1 CdLSGSE12603 102983782 102984438 656 0
hScc1 CdLSGSE12603 102989549 102990104 555 0
hScc1 CdLSGSE12603 102993065 102993329 264 0
hScc1 CdLSGSE12603 103204720 103205912 1192 0
p63 keratinocytesGSE17611 102983463 102984320 857 0
p63 keratinocytesGSE17611 103049049 103049725 676 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25788 mRNA chr8 103065835 103076254 10419 mRNA NCALD chr8 102768144 103205665 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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