Annotation Detail for ANKRD27
Basic Information Top
| Gene Symbol: | ANKRD27 ( DKFZp434L0718,FLJ00040,VARP ) |
|---|---|
| Gene Full Name: | ankyrin repeat domain 27 (VPS9 domain) |
| Band: | 19q13.11 |
| Quick Links | Entrez ID:84079; OMIM: NA; Uniprot ID:ANR27_HUMAN; ENSEMBL ID: ENSG00000105186; HGNC ID: 25310 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 1023 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 14 | Phosphotyrosine(Jak) | HMM predict |
| 46 | Phosphoserine(IKK) | HMM predict |
| 101 | Phosphotyrosine(Syk) | HMM predict |
| 101 | Phosphotyrosine(EGFR) | HMM predict |
| 122 | Phosphoserine(CK1) | HMM predict |
| 122 | Phosphoserine(CK2) | HMM predict |
| 122 | Phosphoserine(PKG) | HMM predict |
| 122 | Phosphoserine | HMM predict |
| 123 | Phosphoserine | HMM predict |
| 279 | Phosphoserine(CDC2) | HMM predict |
| 299 | Phosphoserine(ATM) | HMM predict |
| 331 | N-linked | HMM predict |
| 337 | N-linked | HMM predict |
| 366 | Phosphoserine(CAMK2) | HMM predict |
| 388 | Phosphoserine(IKK) | HMM predict |
| 418 | Phosphoserine(ATM) | HMM predict |
| 418 | Phosphoserine(CK1) | HMM predict |
| 455 | Phosphothreonine(CDK) | HMM predict |
| 465 | Phosphothreonine(MAPK) | HMM predict |
| 490 | N-linked | HMM predict |
| 498 | Phosphothreonine(MAPK) | HMM predict |
| 531 | Phosphothreonine(MAPK) | HMM predict |
| 567 | Phosphothreonine(MAPK) | HMM predict |
| 627 | Phosphoserine(IKK) | HMM predict |
| 634 | Phosphoserine(CDC2) | HMM predict |
| 634 | Phosphoserine(CDK) | HMM predict |
| 643 | Phosphoserine(CK1) | HMM predict |
| 643 | Phosphoserine(ATM) | HMM predict |
| 650 | Phosphoserine(IKK) | HMM predict |
| 650 | O-linked | HMM predict |
| 653 | Phosphoserine(IKK) | HMM predict |
| 667 | Phosphotyrosine(EGFR) | HMM predict |
| 704 | Phosphoserine(IKK) | HMM predict |
| 715 | S-palmitoyl | HMM predict |
| 738 | N-linked | HMM predict |
| 819 | Phosphoserine(ATM) | HMM predict |
| 916 | Phosphothreonine(PKC) | HMM predict |
| 928 | Phosphotyrosine(INSR) | HMM predict |
| 952 | Phosphothreonine(PKC) | HMM predict |
| 965 | N-linked | HMM predict |
| 1041 | Phosphothreonine(MAPK) | HMM predict |
- RefSeq ID: NM_032139
- Location:chr19 37779746-37857941
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 37857619 | 37858469 | 850 | 103 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 37775726 | 37775758 | 32 | 4005 |
| Oct1 | Hela | GSE14283 | 37775721 | 37775766 | 45 | 4003 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 37825153 | 37826773 | 1620 | 0 |
| CTCF | CD4 | GSE12889 | 37782490 | 37782842 | 352 | 0 |
| CTCF | CD4 | SISSRdata | 37782490 | 37782842 | 352 | 0 |
| CTCF | G2 | GSE9613 | 37782342 | 37782716 | 374 | 0 |
| CTCF | G2 | GSE9613 | 37857233 | 37857659 | 426 | 0 |
| ER | E2-MCF7 | GSE14664 | 37808313 | 37808353 | 40 | 0 |
| ER | E2-MCF7 | GSE14664 | 37849459 | 37849493 | 34 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 37833520 | 37833594 | 74 | 0 |
| FOXA1 | MCF7 | GSE15244 | 37852788 | 37853150 | 362 | 0 |
| FoxA1 | MCF7 | MACSdata | 37852798 | 37852996 | 198 | 0 |
| Gata1 | K562 | GSE18868 | 37810952 | 37811699 | 747 | 0 |
| Gata2 | K562 | GSE18868 | 37811071 | 37811768 | 697 | 0 |
| Nanog | hES | GSE18292 | 37782541 | 37782741 | 200 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 37838802 | 37838831 | 29 | 0 |
| Oct1 | Hela | GSE14283 | 37789868 | 37789894 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 37853430 | 37853470 | 40 | 0 |
| USF1 | HepG2 | E | 37852788 | 37853150 | 362 | 0 |
| hScc1 | Bcell | GSE12603 | 37856946 | 37858194 | 1248 | 0 |
| p130 | shRbSenescent | GSE19898 | 37857788 | 37858067 | 279 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 257 | Unknown | MicroArray | miR-124 | ANKRD27 | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000105186 | G1-to-S transition | n_a | n_a | "epithelium, lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" |
Cis-Nats regulation