Annotation Detail for CCDC55
Basic Information Top
| Gene Symbol: | CCDC55 ( DKFZp434K1421,FLJ37233,HSPC095 ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 55 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:84081; OMIM: NA; Uniprot ID:CCD55_HUMAN; ENSEMBL ID: ENSG00000126653; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 31 | N-linked | HMM predict |
| 33 | Phosphoserine(CK2) | HMM predict |
| 40 | Phosphoserine(CK2) | HMM predict |
| 40 | Phosphoserine(CK1) | HMM predict |
| 42 | Phosphoserine(CK2) | HMM predict |
| 79 | Phosphotyrosine(INSR) | HMM predict |
| 79 | Phosphotyrosine(Syk) | HMM predict |
| 223 | Phosphoserine(CK1) | HMM predict |
| 285 | Phosphoserine(ATM) | HMM predict |
| 287 | N-linked | HMM predict |
| 291 | Phosphoserine(CDC2) | HMM predict |
| 293 | Phosphoserine(CK1) | HMM predict |
| 293 | Phosphoserine | HMM predict |
| 332 | Sulfotyrosine | HMM predict |
| 337 | Phosphotyrosine(Jak) | HMM predict |
| 337 | Sulfotyrosine | HMM predict |
| 387 | Phosphotyrosine(Jak) | HMM predict |
| 405 | Phosphoserine(CK2) | HMM predict |
| 428 | Phosphotyrosine(INSR) | HMM predict |
| 456 | Phosphoserine(PKG) | HMM predict |
| 492 | Phosphoserine(CK1) | HMM predict |
| 494 | Phosphoserine(CK1) | HMM predict |
| 503 | Phosphothreonine(PKA) | HMM predict |
| 539 | Phosphotyrosine(Jak) | HMM predict |
| 552 | Tyrosine | HMM predict |
- RefSeq ID: NM_032141
- Location:chr17 25467959-25537610
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Myc | K562 | GSE19551 | 25467561 | 25468324 | 763 | 17 |
| TAFII | hES | GSE17917 | 25467692 | 25468174 | 482 | 27 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 25541710 | 25541746 | 36 | 4118 |
| Oct1 | Hela | GSE14283 | 25541698 | 25541743 | 45 | 4110 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 25476366 | 25476672 | 306 | 0 |
| CTCF | CD4 | SISSRdata | 25476366 | 25476672 | 306 | 0 |
| CTCF | G2 | GSE9613 | 25467805 | 25468242 | 437 | 0 |
| CTCF | G2 | GSE9613 | 25476399 | 25476674 | 275 | 0 |
| H3K4me3 | colorectal | cancer | 25467556 | 25468858 | 1302 | 0 |
| H3ac | HepG2 | E | 25467556 | 25469856 | 2300 | 0 |
| NRSF | Jurkat | SISSRdata | 25467850 | 25468181 | 331 | 0 |
| Oct1 | Hela | GSE14283 | 25474805 | 25474854 | 49 | 0 |
| Oct1 | Hela | GSE14283 | 25491406 | 25491435 | 29 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 25467484 | 25469510 | 2026 | 0 |
| PHF8 | HeLa | GSE20725 | 25467597 | 25468605 | 1008 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 25467449 | 25468657 | 1208 | 0 |
| Pol2 | GM12878 | GSE19551 | 25467644 | 25468496 | 852 | 0 |
| PolII | HeLa | GSE12783 | 25467206 | 25469310 | 2104 | 0 |
| RARG | MCF7 | GSE15244 | 25467877 | 25468266 | 389 | 0 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 25474802 | 25474842 | 40 | 0 |
| Rb | Quiescent | GSE19898 | 25468239 | 25468660 | 421 | 0 |
| Rb | Senescent | GSE19898 | 25467920 | 25468719 | 799 | 0 |
| TAF | Hela | GSE8489 | 25467556 | 25469856 | 2300 | 0 |
| TAF | k562 | GSE8489 | 25467556 | 25469856 | 2300 | 0 |
| hScc1 | Bcell | GSE12603 | 25476360 | 25476674 | 314 | 0 |
| hScc1 | CdLS | GSE12603 | 25476360 | 25476674 | 314 | 0 |
| p130 | Senescent | GSE19898 | 25467732 | 25468799 | 1067 | 0 |
| p130 | shRbQuiescent | GSE19898 | 25467663 | 25468413 | 750 | 0 |
| p130 | shRbSenescent | GSE19898 | 25467705 | 25468716 | 1011 | 0 |
Validated miRNA targets