AutismKB 2.0

Annotation Detail for ARID5B


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Basic Information Top
Gene Symbol:ARID5B ( DESRT,FLJ21150,MRF2 )
Gene Full Name: AT rich interactive domain 5B (MRF1-like)
Band: 10q21.2
Quick LinksEntrez ID:84159; OMIM: 608538; Uniprot ID:ARI5B_HUMAN; ENSEMBL ID: ENSG00000150347; HGNC ID: 17362
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
336N6,N6-dimethyllysine.
1002Phosphoserine.
Location(AA) Modifications Resource
1002Phosphoserine.Swiss-Prot 53.0
1002PhosphoserinePhospho.ELM 6.0
1032PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
76Phosphotyrosine(INSR)HMM predict
237N-linkedHMM predict
264PhosphoserineHMM predict
365Phosphotyrosine(INSR)HMM predict
388O-linkedHMM predict
389Phosphoserine(IKK)HMM predict
427N-linkedHMM predict
429Phosphoserine(CK2)HMM predict
429Phosphoserine(ATM)HMM predict
429Phosphoserine(CK1)HMM predict
432N-linkedHMM predict
434N-linkedHMM predict
441Phosphothreonine(PKC)HMM predict
480Phosphoserine(ATM)HMM predict
483Phosphoserine(IKK)HMM predict
518N-linkedHMM predict
539PhosphothreonineHMM predict
544O-linkedHMM predict
566Phosphoserine(CDC2)HMM predict
566Phosphoserine(MAPK)HMM predict
597Phosphoserine(IKK)HMM predict
601O-linkedHMM predict
609N-linkedHMM predict
625N-linkedHMM predict
673N-linkedHMM predict
712Phosphoserine(CDC2)HMM predict
712O-linkedHMM predict
731Phosphoserine(CK1)HMM predict
733Phosphoserine(ATM)HMM predict
781Phosphoserine(ATM)HMM predict
862Phosphotyrosine(EGFR)HMM predict
867N-linkedHMM predict
918Phosphothreonine(PKA)HMM predict
945Phosphoserine(ATM)HMM predict
975Phosphoserine(ATM)HMM predict
1032Phosphoserine(IKK)HMM predict
1054Phosphoserine(CK1)HMM predict
1075Phosphoserine(CDC2)HMM predict
1089Phosphoserine(IKK)HMM predict
1108N-linkedHMM predict
1113Phosphoserine(MAPK)HMM predict
1133Phosphoserine(CDC2)HMM predict
1175ProlineHMM predict
1177Phosphoserine(ATM)HMM predict
1180O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032199
  • Location:chr10 63331448-63526708
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 63326780 63327010 230 4554
CTCF CD4SISSRdata 63326780 63327010 230 4554
H3K4me3 colorectalcancer 63330570 63331283 713 522
Oct1 H2O2-HelaGSE14283 63316428 63316474 46 14998
Oct1 HelaGSE14283 63316428 63316472 44 14999
Oct1 HelaGSE14283 63317998 63318054 56 13423
Oct1 HelaGSE14283 63331152 63331208 56 269
VDR GM10855-stimGSE22484 63326433 63327553 1120 4456
hScc1 BcellGSE12603 63326643 63327762 1119 4246
hScc1 CdLSGSE12603 63326569 63328185 1616 4072
hScc1 CdLSGSE12603 63330002 63330362 360 1267
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 63531445 63531968 523 4998
FoxA1 MCF7MACSdata 63536938 63537266 328 10394
FoxA1 MCF7MACSdata 63542094 63542373 279 15525
Oct1 H2O2-HelaGSE14283 63546209 63546244 35 19518
RARA MCF7GSE15244 63538509 63539195 686 12144
TFAP2C MCF7GSE21234 63536857 63537321 464 10381
TFAP2C MCF7GSE21234 63538568 63539350 782 12251
TFAP2C MCF7GSE21234 63542019 63542571 552 15587
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 63390512 63392817 2305 0
CTCF CD4GSE12889 63506652 63506828 176 0
CTCF CD4SISSRdata 63506652 63506828 176 0
CTCF HelaGSE12889 63408801 63408987 186 0
ER E2-MCF7GSE14664 63413917 63413949 32 0
ER E2-MCF7GSE14664 63485582 63485669 87 0
ER MCF7GSE19013 63347822 63348668 846 0
ER MCF7GSE19013 63519383 63519957 574 0
FoxA1 MCF7MACSdata 63347981 63348204 223 0
FoxA1 MCF7MACSdata 63361696 63361886 190 0
H3K4me2 HCT116GSE10453 63331915 63332851 936 0
H3K4me3 colorectalcancer 63331796 63332885 1089 0
H3ac HepG2E 63330118 63332990 2872 0
H3ac HepG2E 63333324 63333699 375 0
H3ac HepG2E 63475481 63475697 216 0
H3ac HepG2E 63476169 63476718 549 0
H3ac HepG2E 63477110 63480956 3846 0
Myc K562GSE19551 63445695 63446092 397 0
NFkBII GM12878GSE19485 63394014 63396560 2546 0
NRSF JurkatSISSRdata 63444094 63444269 175 0
NRSF mAbJurkat 63331551 63332571 1020 0
Nanog hESGSE18292 63416036 63416875 839 0
Oct1 H2O2-HelaGSE14283 63411046 63411085 39 0
Oct1 HelaGSE14283 63364642 63364677 35 0
Oct1 HelaGSE14283 63411041 63411085 44 0
Oct1 HelaGSE14283 63414643 63414696 53 0
RARA MCF7GSE15244 63353124 63354015 891 0
RARG MCF7GSE15244 63353016 63353370 354 0
RARG MCF7GSE15244 63421820 63421993 173 0
Rb SenescentGSE19898 63478856 63479443 587 0
STAT1 HeLaGSE12782 63421594 63424006 2412 0
STAT1 HeLaGSE12783 63366921 63370043 3122 0
STAT1 HeLaGSE12783 63421594 63423707 2113 0
STAT1 HeLaGSE12783 63434724 63436015 1291 0
STAT1 IFNSISSRdata 63435117 63435986 869 0
TAF HelaGSE8489 63331833 63332780 947 0
TAF k562GSE8489 63331796 63332815 1019 0
TFAP2C MCF7GSE21234 63405071 63405393 322 0
TFAP2C MCF7GSE21234 63466868 63467351 483 0
TFAP2C MCF7GSE21234 63478602 63479380 778 0
USF1 HepG2E 63451130 63452084 954 0
USF1 HepG2E 63475481 63475771 290 0
USF2 HepG2E 63475481 63475734 253 0
USF2 HepG2E 63477665 63479618 1953 0
USF2 HepG2E 63524116 63524837 721 0
USF2 HepG2E 63525227 63526481 1254 0
hScc1 BcellGSE12603 63332259 63332668 409 0
hScc1 BcellGSE12603 63333150 63333735 585 0
hScc1 BcellGSE12603 63468225 63468982 757 0
hScc1 CdLSGSE12603 63332188 63333699 1511 0
hScc1 CdLSGSE12603 63417545 63418153 608 0
hScc1 CdLSGSE12603 63429776 63430320 544 0
hScc1 CdLSGSE12603 63468161 63468946 785 0
p130 SenescentGSE19898 63506347 63506939 592 0
p130 shRbQuiescentGSE19898 63478681 63478978 297 0
p63 keratinocytesGSE17611 63448905 63449912 1007 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3217 mRNA ARID5B chr10 63479007 63515620 545 mRNA chr10 63513000 63513545 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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