Annotation Detail for STX7

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	STX7 ( - )
Gene Full Name:	syntaxin 7
Band:	6q23.2
Quick Links	Entrez ID:8417; OMIM: 603217; Uniprot ID:STX7_HUMAN; ENSEMBL ID: ENSG00000079950; HGNC ID: 11442
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
2	N-acetylserine.
3	Phosphotyrosine.
45	Phosphoserine (By similarity).
79	Phosphothreonine.
125	Phosphoserine (By similarity).
126	Phosphoserine (By similarity).
129	Phosphoserine.
205	Phosphoserine (By similarity).

Location(AA)	Modifications	Resource
2	N-acetylserine.	Swiss-Prot 53.0
79	Phosphothreonine (By similarity).	Swiss-Prot 53.0
125	Phosphoserine (By similarity).	Swiss-Prot 53.0
126	Phosphoserine (By similarity).	Swiss-Prot 53.0
129	Phosphoserine (By similarity).	Swiss-Prot 53.0

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Fos	K562	GSE19551	132875683	132876342	659	154
H3ac	HepG2	E	132876553	132877031	478	934

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
hScc1	Bcell	GSE12603	132819625	132820056	431	3008
hScc1	CdLS	GSE12603	132819334	132820280	946	3042

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	CD4	GSE12889	132847089	132847314	225
CTCF	CD4	SISSRdata	132847089	132847314	225
CTCF	G2	GSE9613	132847204	132847554	350
H3ac	HepG2	E	132873835	132874199	364
NRSF	Jurkat	SISSRdata	132875611	132875803	192
Oct1	H2O2-Hela	GSE14283	132863262	132863290	28
Oct1	Hela	GSE14283	132849315	132849345	30
Oct1	Hela	GSE14283	132863262	132863290	28
Rb	Growing	GSE19898	132827642	132827904	262
USF1	HepG2	E	132873609	132874266	657
hScc1	Bcell	GSE12603	132847095	132847554	459
hScc1	CdLS	GSE12603	132846820	132847554	734

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	18668040
hsa-let-7b*	hsa-let-7b	22	18668040
hsa-miR-1	hsa-mir-1-2	18	18668040
hsa-miR-1	hsa-mir-1-1	20	18668040
hsa-miR-155	hsa-mir-155	21	18668040
hsa-miR-155*	hsa-mir-155	21	18668040
hsa-miR-16	hsa-mir-16-1	13	18668040
hsa-miR-16	hsa-mir-16-2	3	18668040
hsa-miR-30a	hsa-mir-30a	6	18668040
hsa-miR-30a*	hsa-mir-30a	6	18668040
hsa-miR-30b	hsa-mir-30b	8	18668040
hsa-miR-30b*	hsa-mir-30b	8	18668040
hsa-miR-30c	hsa-mir-30c-2	6	18668040
hsa-miR-30c	hsa-mir-30c-1	1	18668040
hsa-miR-30c-1*	hsa-mir-30c-1	1	18668040
hsa-miR-30c-2*	hsa-mir-30c-2	6	18668040
hsa-miR-30d	hsa-mir-30d	8	18668040
hsa-miR-30d*	hsa-mir-30d	8	18668040
hsa-miR-30e	hsa-mir-30e	1	18668040
hsa-miR-30e*	hsa-mir-30e	1	18668040

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
1285	Unknown	pSILAC	miR-30	STX7	down 50-25%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000079950		n_a	n_a	n_a	"epithelium, lymphoblast, lymphocyte, muscle cell"	"benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
23179	mRNA		chr6	132836352	132836897	545	mRNA	STX7	chr6	132822847	132875859	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018