Annotation Detail for FAR1

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	FAR1 ( DKFZp686A0370,DKFZp686P18247,FLJ22728,FLJ33561,MLSTD2,SDR10E1 )
Gene Full Name:	fatty acyl CoA reductase 1
Band:	11p15.3
Quick Links	Entrez ID:84188; OMIM: NA; Uniprot ID:FACR1_HUMAN; ENSEMBL ID: ENSG00000197601; HGNC ID: 26222
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:6 results

No data

Location(AA)	Modification	Resource
51	Phosphothreonine(MAPK)	HMM predict
51	Phosphothreonine(CDK)	HMM predict
304	N-linked	HMM predict
341	N-linked	HMM predict
345	N-linked	HMM predict
501	Tyrosine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_032228
Location:chr11 13646846-13710466
strand:+

Upstream the gene:6 results
Downstream the gene:1 results
Inside the gene:7 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
FOXA1	DLD1	GSE12801	13641698	13642023	325	4986
Fos	K562	GSE19551	13646214	13646989	775	245
PHF8	293T	GSE20725	13645844	13646541	697	654
PHF8	HeLa	GSE20725	13645938	13647503	1565	126
hScc1	Bcell	GSE12603	13646330	13646707	377	328
p130	Senescent	GSE19898	13646183	13646881	698	315

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
RNAII	Tamoxifen-MCF7	GSE14664	13722919	13722954	35	12470

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	MCF7	GSE19013	13697199	13697984	785	0
FOXA1	MCF7	GSE15244	13647361	13647753	392	0
FOXA1	MCF7	GSE15244	13650699	13650918	219	0
FoxA1	MCF7	MACSdata	13650718	13650950	232	0
H3K4me3	colorectal	cancer	13647169	13647875	706	0
Nanog	ES	GSE20650	13708614	13709077	463	0
TAF	k562	GSE8489	13647334	13647827	493	0

Validated miRNA targets

miR Walk:0 results
Tarbase V5.0:1 results

ID in Tarbase	Data Type	Support Type	miRNA	Gene	Direct Support	Publication
969	Unknown	pSILAC	miR-155	MLSTD2	down >75%	18668040
Ensembl	Protein Type	Differentially expressed in	Pathology or Event	Mis Regulation	Gene Expression	Tumour Involvement
ENSG00000197601		n_a	n_a	n_a	"muscle cell, epithelium, lymphocyte"	"malignant tumour, carcinoma, benign tumour, leukaemia, sarcoma"

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved