AutismKB 2.0

Annotation Detail for HVCN1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:HVCN1 ( HV1,MGC15619,VSOP )
Gene Full Name: hydrogen voltage-gated channel 1
Band: 12q24.11
Quick LinksEntrez ID:84329; OMIM: 611227; Uniprot ID:HVCN1_HUMAN; ENSEMBL ID: ENSG00000122986; HGNC ID: 28240
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001040107
  • Location:chr12 109570873-109611999
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 109620507 109620807 300 8658
CTCF CD4SISSRdata 109620507 109620807 300 8658
CTCF G2GSE9613 109620488 109620950 462 8720
hScc1 BcellGSE12603 109620488 109620950 462 8720
hScc1 CdLSGSE12603 109620488 109620982 494 8736
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 109611115 109611693 578 0
p130 QuiescentGSE19898 109611422 109611620 198 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6609 mRNA FLJ21127 chr12 109514661 109549650 83 mRNA MGC15619 chr12 109549304 109592996Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018