AutismKB 2.0

Annotation Detail for FOXN1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:FOXN1 ( FKHL20,RONU,WHN )
Gene Full Name: forkhead box N1
Band: 17q11.2
Quick LinksEntrez ID:8456; OMIM: 600838; Uniprot ID:FOXN1_HUMAN; ENSEMBL ID: ENSG00000109101; HGNC ID: 12765
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
36Phosphoserine(CDC2)HMM predict
36O-linkedHMM predict
36Phosphoserine(IKK)HMM predict
50Phosphoserine(IKK)HMM predict
60Phosphothreonine(CDK)HMM predict
62Phosphoserine(PKB)HMM predict
62Phosphoserine(PKA)HMM predict
62O-linkedHMM predict
72Phosphoserine(MAPK)HMM predict
72Phosphoserine(CDC2)HMM predict
72Phosphoserine(PKB)HMM predict
94Phosphoserine(CDC2)HMM predict
96Phosphoserine(ATM)HMM predict
126Phosphotyrosine(Syk)HMM predict
188Phosphoserine(ATM)HMM predict
227Phosphoserine(ATM)HMM predict
235O-linkedHMM predict
291Phosphoserine(PKA)HMM predict
322N-linkedHMM predict
326N-linkedHMM predict
334N-linkedHMM predict
338Phosphoserine(CDC2)HMM predict
383Phosphoserine(CK1)HMM predict
405O-linkedHMM predict
487Phosphothreonine(MAPK)HMM predict
497Phosphothreonine(MAPK)HMM predict
497Phosphothreonine(CDC2)HMM predict
533N-linkedHMM predict
563O-linkedHMM predict
565Phosphoserine(CDC2)HMM predict
565Phosphoserine(CDK)HMM predict
565Phosphoserine(IKK)HMM predict
568O-linkedHMM predict
568O-linkedHMM predict
569O-linkedHMM predict
570Phosphoserine(IKK)HMM predict
629O-linkedHMM predict
637Phosphotyrosine(Syk)HMM predict
639Phosphoserine(CDK)HMM predict
639Phosphoserine(ATM)HMM predict
639Phosphoserine(CDK)HMM predict
639Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003593
  • Location:chr17 23875085-23889299
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23868951 23869342 391 5939
ER E2-MCF7GSE14664 23864304 23864339 35 10764
ER Fulvestrant-MCF7GSE14664 23863504 23863538 34 11565
GABP HelaGSE8489 23866338 23869532 3194 7151
GABP k562GSE8489 23866373 23869532 3159 7133
KLF4 hESGSE17917 23863888 23864151 263 11066
LIN54 SGSE7516 23867589 23869532 1943 6525
Oct1 H2O2-HelaGSE14283 23864450 23864478 28 10622
Oct1 HelaGSE14283 23863499 23863532 33 11570
Oct1 HelaGSE14283 23864396 23864530 134 10623
RARA MCF7GSE15244 23867487 23869197 1710 6744
RARG MCF7GSE15244 23867337 23869532 2195 6651
c MYCMCF7 23866912 23869562 2650 6849
hScc1 BcellGSE12603 23874412 23874725 313 517
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 23891946 23892206 260 2777
CTCF CD4SISSRdata 23891946 23892206 260 2777
CTCF JurkatGSE12889 23891979 23892245 266 2813
CTCF G2GSE9613 23891725 23892051 326 2589
FoxA1 MCF7MACSdata 23892680 23892898 218 3490
hScc1 BcellGSE12603 23891609 23892051 442 2531
hScc1 CdLSGSE12603 23891654 23892051 397 2553
hScc1 G2GSE9613 23891609 23892051 442 2531
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23879147 23879422 275 0
ER MCF7GSE19013 23876128 23877250 1122 0
ER MCF7GSE19013 23883587 23884416 829 0
ER MCF7GSE19013 23887478 23888744 1266 0
Gata1 K562GSE18868 23878261 23879051 790 0
Gata2 K562GSE18868 23878082 23878908 826 0
Oct1 HelaGSE14283 23886267 23886337 70 0
TFAP2C MCF7GSE21234 23883975 23884974 999 0
TFAP2C MCF7GSE21234 23887704 23888864 1160 0
hScc1 BcellGSE12603 23875720 23876188 468 0
hScc1 BcellGSE12603 23885820 23886287 467 0
hScc1 BcellGSE12603 23888597 23888947 350 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved