AutismKB 2.0

Annotation Detail for TTF2


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TTF2 ( HuF2 )
Gene Full Name: transcription termination factor, RNA polymerase II
Band: 1p13.1
Quick LinksEntrez ID:8458; OMIM: 604718; Uniprot ID:TTF2_HUMAN; ENSEMBL ID: ENSG00000116830; HGNC ID: 12398
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
396Phosphoserine.
460Phosphoserine.
740DEAH box.
883Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
78S-palmitoylHMM predict
99Phosphoserine(CK1)HMM predict
103Phosphoserine(CK1)HMM predict
106N-linkedHMM predict
217Phosphoserine(CAMK2)HMM predict
236Phosphoserine(CK1)HMM predict
236O-linkedHMM predict
241Phosphoserine(CK1)HMM predict
244Phosphoserine(ATM)HMM predict
273O-linkedHMM predict
321Phosphoserine(IKK)HMM predict
350Phosphoserine(CK2)HMM predict
350Phosphoserine(CK2)HMM predict
351PhosphoserineHMM predict
351Phosphoserine(CK2)HMM predict
396Phosphoserine(PKG)HMM predict
396Phosphoserine(CDC2)HMM predict
426Phosphoserine(IKK)HMM predict
427Phosphothreonine(PKA)HMM predict
427Phosphothreonine(PKC)HMM predict
460Phosphoserine(ATM)HMM predict
471Phosphoserine(IKK)HMM predict
482O-linkedHMM predict
483O-linkedHMM predict
500Phosphothreonine(PKA)HMM predict
515O-linkedHMM predict
586Phosphoserine(PKG)HMM predict
724Phosphothreonine(CDK)HMM predict
800N-linkedHMM predict
848Phosphoserine(CK2)HMM predict
848Phosphoserine(CK2)HMM predict
855Phosphotyrosine(SRC)HMM predict
855Phosphotyrosine(EGFR)HMM predict
855Phosphotyrosine(Syk)HMM predict
864Phosphoserine(IKK)HMM predict
875Phosphoserine(PKG)HMM predict
878N-linkedHMM predict
883Phosphoserine(CDC2)HMM predict
908Phosphoserine(IKK)HMM predict
927S-palmitoylHMM predict
928S-palmitoylHMM predict
966Phosphoserine(IKK)HMM predict
966Phosphoserine(CK1)HMM predict
969Phosphoserine(CK1)HMM predict
971O-linkedHMM predict
973Phosphoserine(IKK)HMM predict
975N-linkedHMM predict
1056N-linkedHMM predict
1076N-linkedHMM predict
1081N-linkedHMM predict
1091N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003594
  • Location:chr1 117404471-117447011
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 117399581 117399792 211 4785
CTCF G2GSE9613 117403836 117404054 218 527
E2F4 G0GSE7516 117403591 117404812 1221 270
FOXA1 MCF7GSE15244 117403591 117404775 1184 289
Fos K562GSE19551 117403385 117404736 1351 411
LIN54 G0GSE7516 117403764 117404592 828 294
LIN9 G0GSE7516 117403417 117405078 1661 224
LIN9 SGSE7516 117403388 117405078 1690 239
PHF8 293TGSE20725 117403226 117404943 1717 387
PHF8 HeLaGSE20725 117403333 117404383 1050 614
TAF k562GSE8489 117402425 117403981 1556 1269
TFAP2C MCF7GSE21234 117403971 117404525 554 224
hScc1 BcellGSE12603 117399543 117399792 249 4804
hScc1 BcellGSE12603 117403764 117404249 485 465
hScc1 CdLSGSE12603 117399361 117399792 431 4895
p130 QuiescentGSE19898 117403762 117404577 815 302
p130 SenescentGSE19898 117403793 117404599 806 276
p130 shRbQuiescentGSE19898 117403733 117404735 1002 238
p130 shRbSenescentGSE19898 117403858 117404963 1105 61
p130 G0GSE7516 117403417 117405125 1708 201
p130 SGSE7516 117403521 117404520 999 451
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 117436889 117438669 1780 0
CTCF CD4GSE12889 117412015 117412178 163 0
CTCF CD4SISSRdata 117412015 117412178 163 0
CTCF HelaGSE12889 117411883 117412189 306 0
CTCF G2GSE9613 117411951 117412355 404 0
NFkBII GM12878GSE19485 117402383 117407472 5089 0
Rb GrowingGSE19898 117437339 117437484 145 0
STAT1 HeLaGSE12783 117436894 117439999 3105 0
TAF k562GSE8489 117405078 117405912 834 0
hScc1 BcellGSE12603 117411906 117412355 449 0
hScc1 CdLSGSE12603 117411720 117412355 635 0
hScc1 G2GSE9613 117412024 117412355 331 0
p130 QuiescentGSE19898 117437268 117437654 386 0
p130 SenescentGSE19898 117437208 117437658 450 0
p130 shRbQuiescentGSE19898 117404802 117405033 231 0
p130 shRbSenescentGSE19898 117437270 117437676 406 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved