AutismKB 2.0

Annotation Detail for USP38


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Basic Information Top
Gene Symbol:USP38 ( FLJ35970,HP43.8KD,KIAA1891 )
Gene Full Name: ubiquitin specific peptidase 38
Band: 4q31.21
Quick LinksEntrez ID:84640; OMIM: NA; Uniprot ID:UBP38_HUMAN; ENSEMBL ID: ENSG00000170185; HGNC ID: 20067
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
81N-linkedHMM predict
193Phosphoserine(ATM)HMM predict
223Phosphoserine(IKK)HMM predict
418N-linkedHMM predict
426O-linkedHMM predict
428Phosphoserine(IKK)HMM predict
437Phosphoserine(CK2)HMM predict
503Phosphotyrosine(Jak)HMM predict
575Phosphothreonine(MAPK)HMM predict
637Phosphoserine(CDC2)HMM predict
637Phosphoserine(CDK)HMM predict
654O-linkedHMM predict
660Phosphotyrosine(Abl)HMM predict
661N-linkedHMM predict
680Phosphoserine(CDC2)HMM predict
690N-linkedHMM predict
695N-linkedHMM predict
715Phosphothreonine(MAPK)HMM predict
737Phosphotyrosine(INSR)HMM predict
737Phosphotyrosine(Jak)HMM predict
760Phosphotyrosine(SRC)HMM predict
802Phosphoserine(IKK)HMM predict
804Phosphoserine(CK1)HMM predict
864N-linkedHMM predict
866O-linkedHMM predict
886Phosphoserine(ATM)HMM predict
917N-linkedHMM predict
928Phosphoserine(CDK)HMM predict
942Phosphotyrosine(INSR)HMM predict
959N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032557
  • Location:chr4 144325547-144362088
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 144323383 144323443 60 2135
Oct1 HelaGSE14283 144308712 144308740 28 16822
Oct1 HelaGSE14283 144323370 144323443 73 2141
PolII HeLaGSE12783 144324204 144326811 2607 40
TAF HelaGSE8489 144324198 144325188 990 855
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 144374681 144374709 28 12607
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 144325117 144326099 982 0
ER E2-MCF7GSE14664 144339316 144339353 37 0
H3K4me3 colorectalcancer 144326242 144327465 1223 0
H3ac HepG2E 144326204 144327571 1367 0
Oct1 H2O2-HelaGSE14283 144328508 144328535 27 0
hScc1 BcellGSE12603 144324995 144326099 1104 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20269 mRNA USP38 chr4 144463702 144500244 803 mRNA chr4 144475058 144475861 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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