Annotation Detail for TRIM55
Basic Information Top
| Gene Symbol: | TRIM55 ( MURF-2,RNF29 ) |
|---|---|
| Gene Full Name: | tripartite motif-containing 55 |
| Band: | 8q13.1 |
| Quick Links | Entrez ID:84675; OMIM: 606469; Uniprot ID:TRI55_HUMAN; ENSEMBL ID: ENSG00000147573; HGNC ID: 14215 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 11 | Phosphoserine(CK1) | HMM predict |
| 11 | Phosphoserine(PKC) | HMM predict |
| 42 | S-palmitoyl | HMM predict |
| 61 | Phosphotyrosine(Jak) | HMM predict |
| 68 | Phosphothreonine(PKC) | HMM predict |
| 78 | S-palmitoyl | HMM predict |
| 191 | Phosphoserine(ATM) | HMM predict |
| 304 | Phosphotyrosine(INSR) | HMM predict |
| 304 | Phosphotyrosine(Syk) | HMM predict |
| 380 | Phosphoserine(CK1) | HMM predict |
| 380 | Phosphoserine(ATM) | HMM predict |
| 394 | Phosphoserine(IKK) | HMM predict |
| 394 | O-linked | HMM predict |
| 395 | O-linked | HMM predict |
| 395 | Phosphoserine(CDC2) | HMM predict |
| 420 | O-linked | HMM predict |
| 424 | Phosphothreonine(CK2) | HMM predict |
| 426 | O-linked | HMM predict |
| 428 | O-linked | HMM predict |
| 460 | Phosphothreonine(CDC2) | HMM predict |
| 460 | Phosphothreonine(MAPK) | HMM predict |
| 463 | O-linked | HMM predict |
| 525 | O-linked | HMM predict |
| 527 | O-linked | HMM predict |
| 527 | Phosphoserine(IKK) | HMM predict |
| 544 | Asparagine | HMM predict |
- RefSeq ID: NM_033058
- Location:chr8 67201831-67250269
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 67198844 | 67199012 | 168 | 2904 |
| Fos | K562 | GSE19551 | 67198655 | 67199060 | 405 | 2974 |
| P300 | T30-glioblastoma | GSE21026 | 67198027 | 67200118 | 2091 | 2759 |
| PHF8 | Hs68plusFBS | GSE20725 | 67187381 | 67189788 | 2407 | 13247 |
| Pol3 | GM12878 | GSE19551 | 67187929 | 67189386 | 1457 | 13174 |
| RARA | MCF7 | GSE15244 | 67188713 | 67189741 | 1028 | 12605 |
| RARA | MCF7 | GSE15244 | 67198844 | 67199364 | 520 | 2728 |
| RARG | MCF7 | GSE15244 | 67188879 | 67189644 | 765 | 12570 |
| RARG | MCF7 | GSE15244 | 67198844 | 67199364 | 520 | 2728 |
| TAF | k562 | GSE8489 | 67188643 | 67189951 | 1308 | 12535 |
| TFAP2C | MCF7 | GSE21234 | 67198681 | 67199294 | 613 | 2844 |
| TFAP2C | MCF7 | GSE21234 | 67201445 | 67201976 | 531 | 121 |
| p130 | Senescent | GSE19898 | 67188895 | 67189627 | 732 | 12571 |
| p130 | shRbQuiescent | GSE19898 | 67188741 | 67189608 | 867 | 12657 |
| p63 | keratinocytes | GSE17611 | 67198541 | 67199556 | 1015 | 2783 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 67209691 | 67210150 | 459 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 67248691 | 67248726 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 67248691 | 67248724 | 33 | 0 |
| RARG | MCF7 | GSE15244 | 67201780 | 67202291 | 511 | 0 |
| RARG | MCF7 | GSE15244 | 67247121 | 67247367 | 246 | 0 |
| TFAP2C | MCF7 | GSE21234 | 67204945 | 67205446 | 501 | 0 |
Validated miRNA targets