AutismKB 2.0

Annotation Detail for ATAD1


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Basic Information Top
Gene Symbol:ATAD1 ( AFDC1,FLJ14600 )
Gene Full Name: ATPase family, AAA domain containing 1
Band: 10q23.31
Quick LinksEntrez ID:84896; OMIM: NA; Uniprot ID:ATAD1_HUMAN; ENSEMBL ID: ENSG00000138138; HGNC ID: 25903
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
114N6-acetyllysine.
146Phosphothreonine.
322Phosphoserine (By similarity).
Location(AA) Modifications Resource
46Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in ubiquitin).Swiss-Prot 53.0
322Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
200N-linkedHMM predict
202Phosphoserine(CK1)HMM predict
204Phosphoserine(CK1)HMM predict
316N-linkedHMM predict
319Phosphoserine(CK1)HMM predict
319Phosphoserine(CK2)HMM predict
322Phosphoserine(CK2)HMM predict
346Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032810
  • Location:chr10 89502854-89567896
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 89567526 89568903 1377 318
H3K4me3 colorectalcancer 89568156 89568839 683 601
KLF4 hESGSE17917 89567898 89568105 207 105
PHF8 293TGSE20725 89567423 89568443 1020 37
PHF8 Hs68plusFBSGSE20725 89567069 89568864 1795 70
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 89521727 89521911 184 0
CTCF CD4SISSRdata 89521727 89521911 184 0
H3K4me3 colorectalcancer 89566387 89567549 1162 0
H3ac HepG2E 89566421 89568119 1698 0
Nanog hESGSE18292 89521721 89521960 239 0
Oct1 HelaGSE14283 89512628 89512659 31 0
Oct1 HelaGSE14283 89553136 89553171 35 0
PHF8 HeLaGSE20725 89567344 89568352 1008 0
hScc1 BcellGSE12603 89521645 89521896 251 0
hScc1 CdLSGSE12603 89521611 89521896 285 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3432 EST chr10 89567664 89569000 62 mRNA ATAD1 chr10 89502854 89567897Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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