Annotation Detail for RGS5

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Basic Information Top

Gene Symbol:	RGS5 ( MST092,MST106,MST129,MSTP032,MSTP092,MSTP106,MSTP129 )
Gene Full Name:	regulator of G-protein signaling 5
Band:	1q23.3
Quick Links	Entrez ID:8490; OMIM: 603276; Uniprot ID:RGS5_HUMAN; ENSEMBL ID: ENSG00000143248; HGNC ID: 10001
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:4 results

No data

Location(AA)	Modification	Resource
87	Phosphoserine(CK1)	HMM predict
105	Phosphoserine(CDC2)	HMM predict
117	Phosphotyrosine(EGFR)	HMM predict
176	Phosphotyrosine(EGFR)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_003617
Location:chr1 161378721-161439495
strand:-

Upstream the gene:3 results
Downstream the gene:2 results
Inside the gene:6 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Nanog	hES	GSE18292	161439705	161439943	238	329
Oct1	H2O2-Hela	GSE14283	161445394	161445442	48	5923
Oct1	Hela	GSE14283	161445394	161445441	47	5922

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	E2-MCF7	GSE14664	161367226	161367262	36	11478
Oct1	Hela	GSE14283	161367221	161367250	29	11486

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	161411137	161411768	631	0
ER	E2-MCF7	GSE14664	161382246	161382278	32	0
TAF	k562	GSE8489	161378363	161379153	790	0
hScc1	Bcell	GSE12603	161411070	161411732	662	0
hScc1	CdLS	GSE12603	161411039	161411732	693	0
hScc1	G2	GSE9613	161411039	161411768	729	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
1862	mRNA		chr1	159863122	159914471	41408	mRNA	RGS5	chr1	159843754	159904530	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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