AutismKB 2.0

Annotation Detail for FAM104A


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Basic Information Top
Gene Symbol:FAM104A ( FLJ14775 )
Gene Full Name: family with sequence similarity 104, member A
Band: 17q25.1
Quick LinksEntrez ID:84923; OMIM: NA; Uniprot ID:F104A_HUMAN; ENSEMBL ID: ENSG00000133193; HGNC ID: 25918
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
108Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
25Phosphothreonine(PKC)HMM predict
28Phosphoserine(CDC2)HMM predict
45Phosphoserine(CK1)HMM predict
47Phosphoserine(ATM)HMM predict
47Phosphoserine(IKK)HMM predict
47O-linkedHMM predict
55Phosphoserine(CK1)HMM predict
57Phosphoserine(CK1)HMM predict
57Phosphoserine(IKK)HMM predict
60PhosphoserineHMM predict
60Phosphoserine(CDC2)HMM predict
72Phosphoserine(ATM)HMM predict
78O-linkedHMM predict
79Phosphoserine(CDK)HMM predict
79O-linkedHMM predict
82Phosphothreonine(CDC2)HMM predict
82Phosphothreonine(MAPK)HMM predict
82O-linkedHMM predict
82O-linkedHMM predict
101N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032837
  • Location:chr17 68715099-68740012
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 68739377 68740728 1351 40
Rb GrowingGSE19898 68740074 68740302 228 176
Rb QuiescentGSE19898 68739971 68740226 255 86
Rb SenescentGSE19898 68739846 68740525 679 173
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 68739808 68740114 306 0
H3K4me2 HCT116GSE10453 68738643 68739462 819 0
H3K4me3 colorectalcancer 68738441 68739396 955 0
H3ac HepG2E 68732777 68733122 345 0
H3ac HepG2E 68738575 68739717 1142 0
Myc K562GSE19551 68735664 68736132 468 0
Oct1 HelaGSE14283 68716513 68716550 37 0
Rb SenescentGSE19898 68736462 68736784 322 0
hScc1 BcellGSE12603 68739588 68740345 757 0
hScc1 CdLSGSE12603 68739687 68740043 356 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-124 hsa-mir-124-1 8 18042700
hsa-miR-124 hsa-mir-124-2 8 18042700
hsa-miR-124 hsa-mir-124-3 20 18042700
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
11602 mRNA COG1 chr17 68700777 68716238 191 mRNA FLJ14775 chr17 68715099 68740013Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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