AutismKB 2.0

Annotation Detail for CGNL1


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Basic Information Top
Gene Symbol:CGNL1 ( FLJ14957,JACOP,KIAA1749,MGC138254 )
Gene Full Name: cingulin-like 1
Band: 15q21.3
Quick LinksEntrez ID:84952; OMIM: 607856; Uniprot ID:CGNL1_HUMAN; ENSEMBL ID: ENSG00000128849; HGNC ID: 25931
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
51ZIM (By similarity).
283Phosphoserine (By similarity).
297Phosphoserine (By similarity).
298Phosphoserine (By similarity).
388Phosphoserine (By similarity).
391Phosphoserine (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_032866
  • Location:chr15 55455996-55630211
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 55451829 55452001 172 4082
CTCF CD4SISSRdata 55451829 55452001 172 4082
CTCF G2GSE9613 55455755 55456153 398 43
Nanog hESGSE18292 55442954 55443448 494 12796
Oct1 HelaGSE14283 55438857 55438894 37 17121
hScc1 BcellGSE12603 55455716 55456153 437 62
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 55639315 55639904 589 9398
CTCF G2GSE9613 55640634 55640954 320 10583
ER E2-MCF7GSE14664 55630290 55630327 37 97
Oct1 HelaGSE14283 55631257 55631317 60 1076
P300 T30-glioblastomaGSE21026 55630875 55631755 880 1104
hScc1 BcellGSE12603 55632494 55632795 301 2433
hScc1 BcellGSE12603 55639421 55639904 483 9451
hScc1 BcellGSE12603 55640634 55640915 281 10563
hScc1 CdLSGSE12603 55640634 55641026 392 10619
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 55607095 55607311 216 0
CTCF CD4GSE12889 55621739 55621942 203 0
CTCF CD4SISSRdata 55607095 55607311 216 0
CTCF CD4SISSRdata 55621739 55621942 203 0
CTCF JurkatGSE12889 55621678 55622020 342 0
CTCF G2GSE9613 55554546 55554756 210 0
CTCF G2GSE9613 55621562 55622173 611 0
CTCF G2GSE9613 55623863 55624191 328 0
ER Breast-CancerGSE22609 55565437 55565903 466 0
ER E2-MCF7GSE14664 55471972 55472010 38 0
FOXA1 MCF7GSE15244 55493630 55494119 489 0
FOXA1 MCF7GSE15244 55584558 55586203 1645 0
FOXA1 eGFPGSE10845 55493630 55494119 489 0
FOXA1 eGFPGSE10845 55584522 55586203 1681 0
FoxA1 MCF7MACSdata 55457101 55457237 136 0
FoxA1 MCF7MACSdata 55585425 55585751 326 0
KLF4 hESGSE17917 55618850 55619256 406 0
NFkBII GM10847GSE19485 55619865 55621068 1203 0
NFkBII GM12878GSE19485 55619331 55621001 1670 0
NFkBII GM12892GSE19485 55619437 55621072 1635 0
NFkBII GM15510GSE19485 55619784 55620932 1148 0
NFkBII GM18526GSE19485 55619680 55621138 1458 0
Oct1 H2O2-HelaGSE14283 55523577 55523604 27 0
Oct1 HelaGSE14283 55471975 55472008 33 0
Oct1 HelaGSE14283 55499124 55499168 44 0
Oct1 HelaGSE14283 55600571 55600635 64 0
Oct4 ESGSE20650 55511609 55512031 422 0
P300 T30-glioblastomaGSE21026 55565314 55565898 584 0
RARA MCF7GSE15244 55584737 55586203 1466 0
TFAP2C MCF7GSE21234 55565474 55565793 319 0
hScc1 BcellGSE12603 55456579 55456754 175 0
hScc1 BcellGSE12603 55498190 55498396 206 0
hScc1 BcellGSE12603 55601102 55601312 210 0
hScc1 BcellGSE12603 55606879 55607437 558 0
hScc1 BcellGSE12603 55621456 55622118 662 0
hScc1 CdLSGSE12603 55606879 55607437 558 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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