Annotation Detail for FBXL20
Basic Information Top
| Gene Symbol: | FBXL20 ( DKFZp564O2364,FLJ21037,Fbl2,Fbl20,MGC15482 ) |
|---|---|
| Gene Full Name: | F-box and leucine-rich repeat protein 20 |
| Band: | 17q12 |
| Quick Links | Entrez ID:84961; OMIM: 609086; Uniprot ID:FXL20_HUMAN; ENSEMBL ID: ENSG00000108306; HGNC ID: 24679 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 417 | Phosphothreonine. | |
| 421 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 417 | Phosphothreonine (By similarity). | Swiss-Prot 53.0 |
| 421 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 130 | O-linked | HMM predict |
| 134 | O-linked | HMM predict |
| 155 | Phosphoserine(IKK) | HMM predict |
| 175 | N-linked | HMM predict |
| 243 | S-palmitoyl | HMM predict |
| 246 | S-palmitoyl | HMM predict |
| 255 | Phosphoserine(IKK) | HMM predict |
| 259 | N-linked | HMM predict |
| 380 | Phosphoserine(CK1) | HMM predict |
| 417 | Phosphothreonine(MAPK) | HMM predict |
| 417 | Phosphothreonine | HMM predict |
| 417 | O-linked | HMM predict |
| 421 | O-linked | HMM predict |
| 429 | Phenylalanine | HMM predict |
| 430 | Phenylalanine | HMM predict |
| 431 | Phenylalanine | HMM predict |
| 432 | Phenylalanine | HMM predict |
- RefSeq ID: NM_032875
- Location:chr17 34670366-34811401
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| E2F4 | G0 | GSE7516 | 34812268 | 34812922 | 654 | 1194 |
| Fos | K562 | GSE19551 | 34812233 | 34812835 | 602 | 1133 |
| LIN9 | G0 | GSE7516 | 34812223 | 34812922 | 699 | 1171 |
| LIN9 | S | GSE7516 | 34812223 | 34812922 | 699 | 1171 |
| PHF8 | HeLa | GSE20725 | 34810927 | 34812280 | 1353 | 202 |
| Rb | Growing | GSE19898 | 34812286 | 34812610 | 324 | 1047 |
| Rb | Quiescent | GSE19898 | 34812341 | 34812687 | 346 | 1113 |
| Rb | Senescent | GSE19898 | 34812183 | 34812660 | 477 | 1020 |
| Rb | shRbSenescence | GSE19898 | 34812285 | 34812650 | 365 | 1066 |
| hScc1 | Bcell | GSE12603 | 34811147 | 34812014 | 867 | 179 |
| p130 | Quiescent | GSE19898 | 34812263 | 34812992 | 729 | 1226 |
| p130 | Senescent | GSE19898 | 34812179 | 34812951 | 772 | 1164 |
| p130 | shRbQuiescent | GSE19898 | 34812093 | 34812999 | 906 | 1145 |
| p130 | shRbSenescent | GSE19898 | 34811592 | 34811833 | 241 | 311 |
| p130 | shRbSenescent | GSE19898 | 34812208 | 34812958 | 750 | 1182 |
| p130 | G0 | GSE7516 | 34811920 | 34812922 | 1002 | 1020 |
| p130 | S | GSE7516 | 34812223 | 34812922 | 699 | 1171 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 34654499 | 34654808 | 309 | 15713 |
| CTCF | CD4 | SISSRdata | 34654499 | 34654808 | 309 | 15713 |
| CTCF | G2 | GSE9613 | 34654455 | 34654954 | 499 | 15662 |
| ER | E2-MCF7 | GSE14664 | 34666145 | 34666178 | 33 | 4205 |
| ER | E2-MCF7 | GSE14664 | 34667806 | 34667864 | 58 | 2532 |
| ER | Fulvestrant-MCF7 | GSE14664 | 34666145 | 34666179 | 34 | 4205 |
| ER | Fulvestrant-MCF7 | GSE14664 | 34667819 | 34667870 | 51 | 2522 |
| FoxA1 | MCF7 | MACSdata | 34658260 | 34658447 | 187 | 12013 |
| Oct1 | H2O2-Hela | GSE14283 | 34664848 | 34664886 | 38 | 5500 |
| Oct1 | Hela | GSE14283 | 34664849 | 34664893 | 44 | 5496 |
| Oct1 | Hela | GSE14283 | 34666145 | 34666182 | 37 | 4203 |
| hScc1 | Bcell | GSE12603 | 34654381 | 34654811 | 430 | 15771 |
| hScc1 | CdLS | GSE12603 | 34654420 | 34654845 | 425 | 15734 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 34671204 | 34671349 | 145 | 0 |
| CTCF | CD4 | SISSRdata | 34671204 | 34671349 | 145 | 0 |
| ER | E2-MCF7 | GSE14664 | 34709047 | 34709102 | 55 | 0 |
| H3K4me3 | colorectal | cancer | 34809827 | 34810920 | 1093 | 0 |
| H3ac | HepG2 | E | 34809755 | 34811038 | 1283 | 0 |
| Myc | K562 | GSE19551 | 34671104 | 34671396 | 292 | 0 |
| Myc | K562 | GSE19551 | 34735727 | 34736001 | 274 | 0 |
| Nanog | hES | GSE18292 | 34690970 | 34691140 | 170 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34679359 | 34679386 | 27 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34690082 | 34690115 | 33 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34690525 | 34690551 | 26 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34736252 | 34736280 | 28 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34740196 | 34740223 | 27 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 34759199 | 34759233 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 34678304 | 34678338 | 34 | 0 |
| Oct1 | Hela | GSE14283 | 34690081 | 34690118 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 34692598 | 34692715 | 117 | 0 |
| Oct1 | Hela | GSE14283 | 34701313 | 34701348 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 34736253 | 34736282 | 29 | 0 |
| TAF | Hela | GSE8489 | 34809875 | 34810728 | 853 | 0 |
| TAF | k562 | GSE8489 | 34809281 | 34810728 | 1447 | 0 |
| hScc1 | CdLS | GSE12603 | 34803541 | 34803903 | 362 | 0 |
| p63 | keratinocytes | GSE17611 | 34787120 | 34788094 | 974 | 0 |
Validated miRNA targets