AutismKB 2.0

Annotation Detail for PPFIA2


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Basic Information Top
Gene Symbol:PPFIA2 ( FLJ41378,MGC132572 )
Gene Full Name: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Band: 12q21.31
Quick LinksEntrez ID:8499; OMIM: 603143; Uniprot ID:LIPA2_HUMAN; ENSEMBL ID: ENSG00000139220; HGNC ID: 9246
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
538Phosphoserine (By similarity).
689Phosphoserine (By similarity).
774Phosphoserine (By similarity).
Location(AA) Modifications Resource
538Phosphoserine (By similarity).Swiss-Prot 53.0
689Phosphoserine (By similarity).Swiss-Prot 53.0
774Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
20PhosphoserineHMM predict
20Phosphoserine(ATM)HMM predict
20Phosphoserine(IKK)HMM predict
23Phosphoserine(IKK)HMM predict
25Phosphoserine(CK1)HMM predict
27Phosphoserine(ATM)HMM predict
29Phosphoserine(CK2)HMM predict
57Phosphoserine(CK1)HMM predict
87Phosphoserine(CK1)HMM predict
125Phosphoserine(CK1)HMM predict
132N-linkedHMM predict
133N-linkedHMM predict
163Phosphoserine(CDC2)HMM predict
163Phosphoserine(IKK)HMM predict
165Phosphoserine(IKK)HMM predict
203Phosphoserine(PKG)HMM predict
236Phosphoserine(CK1)HMM predict
237Phosphothreonine(CK2)HMM predict
257Phosphoserine(PKA)HMM predict
258N-linkedHMM predict
282Phosphotyrosine(Syk)HMM predict
342Phosphothreonine(PKC)HMM predict
355Phosphothreonine(PKA)HMM predict
405Phosphothreonine(PKC)HMM predict
527Phosphoserine(CK1)HMM predict
569Phosphotyrosine(Syk)HMM predict
580MethylarginineHMM predict
601N-linkedHMM predict
621Phosphoserine(CK2)HMM predict
641Phosphoserine(ATM)HMM predict
705O-linkedHMM predict
705O-linkedHMM predict
707O-linkedHMM predict
709O-linkedHMM predict
711Phosphoserine(IKK)HMM predict
712O-linkedHMM predict
717Phosphoserine(ATM)HMM predict
720Phosphoserine(CK2)HMM predict
720Phosphoserine(IKK)HMM predict
720O-linkedHMM predict
724Phosphothreonine(CDK)HMM predict
728Phosphothreonine(MAPK)HMM predict
731Phosphoserine(CDC2)HMM predict
731Phosphoserine(CDK)HMM predict
773O-linkedHMM predict
778Phosphothreonine(MAPK)HMM predict
798Phosphoserine(CK1)HMM predict
801Phosphoserine(CK2)HMM predict
815N-linkedHMM predict
817Phosphoserine(ATM)HMM predict
870Phosphothreonine(PKC)HMM predict
966Phosphoserine(MAPK)HMM predict
966O-linkedHMM predict
966Phosphoserine(CDC2)HMM predict
968O-linkedHMM predict
972O-linkedHMM predict
972Phosphothreonine(PKC)HMM predict
973O-linkedHMM predict
973O-linkedHMM predict
975Phosphothreonine(MAPK)HMM predict
975Phosphothreonine(CDK)HMM predict
975Phosphothreonine(CDC2)HMM predict
996Phosphothreonine(PKC)HMM predict
999Phosphoserine(CK2)HMM predict
1003Phosphoserine(IKK)HMM predict
1098Phosphoserine(ATM)HMM predict
1125Phosphotyrosine(INSR)HMM predict
1179Phosphothreonine(PKC)HMM predict
1216O-linkedHMM predict
1226O-linkedHMM predict
1236Phosphothreonine(PKA)HMM predict
1249N-linkedHMM predict
1255TyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003625
  • Location:chr12 80177486-80677239
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 80175948 80176263 315 1381
hScc1 CdLSGSE12603 80175768 80176386 618 1410
hScc1 G2GSE9613 80175805 80176386 581 1391
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 80354192 80354408 216 0
CBP T0-glioblastomaGSE21026 80554763 80555256 493 0
CBP T30-glioblastomaGSE21026 80354189 80354380 191 0
CTCF G2GSE9613 80247060 80247318 258 0
CTCF G2GSE9613 80369103 80369443 340 0
ER E2-MCF7GSE14664 80210995 80211033 38 0
ER E2-MCF7GSE14664 80301664 80301696 32 0
ER E2-MCF7GSE14664 80423097 80423153 56 0
ER E2-MCF7GSE14664 80593783 80593849 66 0
ER E2-MCF7GSE14664 80593891 80593966 75 0
ER E2-MCF7GSE14664 80604847 80604881 34 0
ER Fulvestrant-MCF7GSE14664 80178184 80178217 33 0
ER Fulvestrant-MCF7GSE14664 80186060 80186112 52 0
FOXA1 DLD1GSE12801 80299768 80300464 696 0
FOXA1 MCF7GSE15244 80186352 80186517 165 0
FOXA1 MCF7GSE15244 80299840 80300755 915 0
FOXA1 MCF7GSE15244 80436124 80436688 564 0
FoxA1 MCF7MACSdata 80299815 80300283 468 0
Myc hESGSE17917 80221899 80222152 253 0
NRSF JurkatGSE13047 80218363 80218717 354 0
NRSF JurkatGSE13047 80268137 80268652 515 0
NRSF JurkatSISSRdata 80268272 80268517 245 0
NRSF mAbJurkat 80268052 80268815 763 0
NRSF-mono JurkatQuESTdata 80218478 80218716 238 0
NRSF-mono JurkatQuESTdata 80268142 80268623 481 0
NRSF pAbJurkat 80529193 80529452 259 0
NRSF-poly JurkatQuESTdata 80218363 80218850 487 0
NRSF-poly JurkatQuESTdata 80268234 80268652 418 0
Nanog ESGSE20650 80369205 80369484 279 0
Nanog ESGSE20650 80611986 80612339 353 0
Nanog hESGSE18292 80319745 80320398 653 0
Oct1 H2O2-HelaGSE14283 80208057 80208097 40 0
Oct1 H2O2-HelaGSE14283 80210861 80210887 26 0
Oct1 H2O2-HelaGSE14283 80210999 80211033 34 0
Oct1 H2O2-HelaGSE14283 80221023 80221057 34 0
Oct1 H2O2-HelaGSE14283 80231681 80231713 32 0
Oct1 H2O2-HelaGSE14283 80255102 80255127 25 0
Oct1 H2O2-HelaGSE14283 80293878 80293912 34 0
Oct1 H2O2-HelaGSE14283 80604668 80604717 49 0
Oct1 H2O2-HelaGSE14283 80637865 80637901 36 0
Oct1 H2O2-HelaGSE14283 80640559 80640589 30 0
Oct1 HelaGSE14283 80208057 80208112 55 0
Oct1 HelaGSE14283 80208149 80208179 30 0
Oct1 HelaGSE14283 80210995 80211035 40 0
Oct1 HelaGSE14283 80254993 80255034 41 0
Oct1 HelaGSE14283 80255100 80255130 30 0
Oct1 HelaGSE14283 80268564 80268591 27 0
Oct1 HelaGSE14283 80289062 80289088 26 0
Oct1 HelaGSE14283 80290645 80290681 36 0
Oct1 HelaGSE14283 80293874 80293944 70 0
Oct1 HelaGSE14283 80308643 80308672 29 0
Oct1 HelaGSE14283 80327160 80327187 27 0
Oct1 HelaGSE14283 80364397 80364466 69 0
Oct1 HelaGSE14283 80423973 80424003 30 0
Oct1 HelaGSE14283 80433308 80433345 37 0
Oct1 HelaGSE14283 80436848 80436881 33 0
Oct1 HelaGSE14283 80465410 80465451 41 0
Oct1 HelaGSE14283 80495934 80496011 77 0
Oct1 HelaGSE14283 80610787 80610824 37 0
Oct1 HelaGSE14283 80614964 80615039 75 0
Oct1 HelaGSE14283 80615166 80615198 32 0
Oct4 hESGSE17917 80676890 80677395 505 0
P300 T0-glioblastomaGSE21026 80354122 80354408 286 0
P300 T30-glioblastomaGSE21026 80354192 80354382 190 0
RARA MCF7GSE15244 80299889 80300646 757 0
RARG MCF7GSE15244 80299966 80300682 716 0
Stat6 IL-4-hr4GSE17850 80636457 80636997 540 0
TFAP2C MCF7GSE21234 80202068 80202385 317 0
TFAP2C MCF7GSE21234 80635824 80636037 213 0
hScc1 CdLSGSE12603 80368791 80369406 615 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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