AutismKB 2.0

Annotation Detail for BCAS1


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Basic Information Top
Gene Symbol:BCAS1 ( AIBC1,NABC1 )
Gene Full Name: breast carcinoma amplified sequence 1
Band: 20q13.2
Quick LinksEntrez ID:8537; OMIM: 602968; Uniprot ID:BCAS1_HUMAN; ENSEMBL ID: ENSG00000064787; HGNC ID: 974
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
552Phosphoserine (By similarity).
Location(AA) Modifications Resource
Location(AA) Modification Resource
38O-linkedHMM predict
66O-linkedHMM predict
153Phosphothreonine(CDK)HMM predict
153Phosphothreonine(MAPK)HMM predict
260Phosphoserine(ATM)HMM predict
284N-linkedHMM predict
285N-linkedHMM predict
296Phosphoserine(CDC2)HMM predict
302Phosphothreonine(PKC)HMM predict
309Phosphothreonine(CK2)HMM predict
314Phosphoserine(IKK)HMM predict
327N-linkedHMM predict
344N-linkedHMM predict
351Phosphoserine(CAMK2)HMM predict
351Phosphoserine(IKK)HMM predict
353O-linkedHMM predict
399Phosphoserine(CDC2)HMM predict
437Phosphoserine(CK1)HMM predict
480O-linkedHMM predict
489O-linkedHMM predict
505Phosphoserine(IKK)HMM predict
505Phosphoserine(PKG)HMM predict
552Phosphoserine(PKG)HMM predict
552Phosphoserine(CAMK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003657
  • Location:chr20 51993923-52120489
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 52134514 52135512 998 14524
FOXA1 eGFPGSE10845 52134514 52135512 998 14524
FoxA1 MCF7MACSdata 52134524 52135568 1044 14557
RARA MCF7GSE15244 52119539 52121502 1963 31
RARA MCF7GSE15244 52122337 52123199 862 2279
RARA MCF7GSE15244 52134514 52135512 998 14524
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 51989968 51990136 168 3872
CTCF CD4SISSRdata 51989968 51990136 168 3872
CTCF G2GSE9613 51989659 51990278 619 3955
FOXA1 MCF7GSE15244 51988421 51990414 1993 4506
FOXA1 eGFPGSE10845 51988421 51990414 1993 4506
P300 T30-glioblastomaGSE21026 51976207 51977283 1076 17179
RARA MCF7GSE15244 51988484 51990999 2515 4182
hScc1 BcellGSE12603 51976579 51976872 293 17198
hScc1 BcellGSE12603 51989659 51990456 797 3866
hScc1 BcellGSE12603 51993673 51994119 446 28
hScc1 CdLSGSE12603 51989659 51990414 755 3887
hScc1 G2GSE9613 51989659 51990308 649 3940
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 52112733 52112988 255 0
CTCF CD4SISSRdata 52112733 52112988 255 0
CTCF G2GSE9613 51993708 51994228 520 0
CTCF G2GSE9613 52112685 52113077 392 0
FOXA1 MCF7GSE10845 52117353 52118835 1482 0
FOXA1 MCF7GSE15244 52117353 52118905 1552 0
FOXA1 MCF7GSE15244 52119539 52121040 1501 0
FOXA1 eGFPGSE10845 52117353 52118905 1552 0
FOXA1 eGFPGSE10845 52119539 52121040 1501 0
Fos K562GSE19551 52023682 52024160 478 0
Fos K562GSE19551 52094102 52094659 557 0
FoxA1 MCF7MACSdata 52117431 52118199 768 0
Gata2 K562GSE18868 52115430 52116076 646 0
H3ac HepG2E 52117819 52119131 1312 0
H3ac HepG2E 52119572 52120687 1115 0
NFkBII GM12878GSE19485 52053780 52055239 1459 0
NFkBII GM12878GSE19485 52112255 52115527 3272 0
NFkBII GM18526GSE19485 52053894 52055283 1389 0
P300 T30-glioblastomaGSE21026 52117505 52117904 399 0
RARA MCF7GSE15244 52112394 52113446 1052 0
RARA MCF7GSE15244 52117353 52118905 1552 0
hScc1 BcellGSE12603 51999438 52000265 827 0
hScc1 BcellGSE12603 52112576 52113043 467 0
hScc1 CdLSGSE12603 51993708 51994228 520 0
hScc1 CdLSGSE12603 52112473 52113113 640 0
hScc1 G2GSE9613 51993637 51994228 591 0
hScc1 G2GSE9613 52112613 52113317 704 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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