AutismKB 2.0

Annotation Detail for TUBGCP6


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Basic Information Top
Gene Symbol:TUBGCP6 ( GCP6 )
Gene Full Name: tubulin, gamma complex associated protein 6
Band: 22q13.33
Quick LinksEntrez ID:85378; OMIM: 610053; Uniprot ID:GCP6_HUMAN; ENSEMBL ID: ENSG00000128159; HGNC ID: 18127
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
439Phosphotyrosine.
443Phosphotyrosine.
629Phosphoserine.
Location(AA) Modifications Resource
629Phosphoserine.Swiss-Prot 53.0
629PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
36Phosphoserine(PKG)HMM predict
210Phosphothreonine(PKA)HMM predict
223Phosphothreonine(PKA)HMM predict
264Phosphoserine(IKK)HMM predict
265N-linkedHMM predict
270Phosphoserine(IKK)HMM predict
270Phosphoserine(ATM)HMM predict
272Phosphoserine(IKK)HMM predict
272Phosphoserine(CK1)HMM predict
288Phosphothreonine(PKC)HMM predict
311Phosphotyrosine(Syk)HMM predict
369Phosphoserine(IKK)HMM predict
386O-linkedHMM predict
392Phosphoserine(IKK)HMM predict
395Phosphoserine(CK1)HMM predict
450Phosphothreonine(CDK)HMM predict
512N-linkedHMM predict
515N-linkedHMM predict
527PhosphothreonineHMM predict
596Phosphotyrosine(Jak)HMM predict
655Phosphoserine(PKB)HMM predict
657Phosphoserine(CK1)HMM predict
747Phosphoserine(PKG)HMM predict
747Phosphoserine(PKB)HMM predict
764Phosphotyrosine(Jak)HMM predict
831Phosphoserine(CDK)HMM predict
831Phosphoserine(CDC2)HMM predict
831Phosphoserine(MAPK)HMM predict
865Phosphothreonine(MAPK)HMM predict
942O-linkedHMM predict
943Phosphothreonine(PKC)HMM predict
964Phosphoserine(CDC2)HMM predict
964O-linkedHMM predict
1019Phosphoserine(ATM)HMM predict
1041O-linkedHMM predict
1052Phosphothreonine(PKC)HMM predict
1066N-linkedHMM predict
1079Phosphothreonine(PKC)HMM predict
1120N-linkedHMM predict
1133Phosphothreonine(PKC)HMM predict
1147N-linkedHMM predict
1160Phosphothreonine(PKC)HMM predict
1174Phosphoserine(ATM)HMM predict
1174Phosphoserine(IKK)HMM predict
1187Phosphothreonine(PKC)HMM predict
1201Phosphoserine(ATM)HMM predict
1201Phosphoserine(IKK)HMM predict
1214Phosphothreonine(PKC)HMM predict
1228N-linkedHMM predict
1283Phosphoserine(MAPK)HMM predict
1290O-linkedHMM predict
1290Phosphothreonine(MAPK)HMM predict
1296O-linkedHMM predict
1307Phosphoserine(CK1)HMM predict
1307Phosphoserine(MAPK)HMM predict
1328O-linkedHMM predict
1328Phosphoserine(IKK)HMM predict
1330O-linkedHMM predict
1331Phosphoserine(CDC2)HMM predict
1333O-linkedHMM predict
1334Phosphoserine(CK2)HMM predict
1334Phosphoserine(IKK)HMM predict
1342Phosphoserine(ATM)HMM predict
1346N-linkedHMM predict
1381Phosphoserine(ATM)HMM predict
1407Phosphoserine(CK2)HMM predict
1431SulfotyrosineHMM predict
1435Phosphotyrosine(INSR)HMM predict
1435Phosphotyrosine(Syk)HMM predict
1487Phosphoserine(PKG)HMM predict
1548Phosphothreonine(MAPK)HMM predict
1702Phosphothreonine(PKC)HMM predict
1753Phosphoserine(ATM)HMM predict
1763MethylarginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020461
  • Location:chr22 48998244-49025526
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 293TGSE20725 49025058 49026168 1110 87
Rb shRbQuiescentGSE19898 49025494 49025623 129 32
VDR GM10861-stimGSE22484 49024623 49026622 1999 96
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 49021752 49021943 191 0
CTCF CD4SISSRdata 49021752 49021943 191 0
CTCF G2GSE9613 49003118 49003336 218 0
CTCF G2GSE9613 49007149 49007476 327 0
CTCF G2GSE9613 49014497 49015638 1141 0
CTCF G2GSE9613 49017005 49018142 1137 0
ETS1 JurkatGSE17954 49024750 49026109 1359 0
FOXA1 MCF7GSE15244 49024368 49025507 1139 0
H3K4me2 HCT116GSE10453 49024212 49024734 522 0
H3K4me3 colorectalcancer 49023068 49023525 457 0
H3K4me3 colorectalcancer 49024212 49024807 595 0
H3ac HepG2E 49023068 49023525 457 0
H3ac HepG2E 49024212 49025098 886 0
Myc K562GSE19551 48999913 49000365 452 0
P300 T30-glioblastomaGSE21026 49024428 49026175 1747 0
RARG MCF7GSE15244 49024368 49025170 802 0
Rb QuiescentGSE19898 49025237 49025650 413 0
Rb shRbSenescenceGSE19898 49025319 49025649 330 0
USF1 HepG2E 49023068 49023525 457 0
USF1 HepG2E 49024212 49024993 781 0
hScc1 BcellGSE12603 48998355 48999308 953 0
hScc1 BcellGSE12603 49000093 49000500 407 0
hScc1 BcellGSE12603 49001669 49002082 413 0
hScc1 BcellGSE12603 49002596 49002834 238 0
hScc1 BcellGSE12603 49003204 49003490 286 0
hScc1 BcellGSE12603 49005844 49006399 555 0
hScc1 BcellGSE12603 49008123 49008480 357 0
hScc1 BcellGSE12603 49014266 49015853 1587 0
hScc1 BcellGSE12603 49017175 49018074 899 0
hScc1 BcellGSE12603 49025021 49025731 710 0
p130 shRbSenescentGSE19898 49025187 49025839 652 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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