Annotation Detail for LMO4
Basic Information Top
| Gene Symbol: | LMO4 ( - ) |
|---|---|
| Gene Full Name: | LIM domain only 4 |
| Band: | 1p22.3 |
| Quick Links | Entrez ID:8543; OMIM: 603129; Uniprot ID:LMO4_HUMAN; ENSEMBL ID: ENSG00000143013; HGNC ID: 6644 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 7 | O-linked | HMM predict |
| 8 | Phosphoserine(ATM) | HMM predict |
| 8 | Phosphoserine(IKK) | HMM predict |
| 115 | S-palmitoyl | HMM predict |
| 132 | N-linked | HMM predict |
- RefSeq ID: NM_006769
- Location:chr1 87566738-87583837
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 87564315 | 87564512 | 197 | 2325 |
| CTCF | CD4 | SISSRdata | 87564315 | 87564512 | 197 | 2325 |
| CTCF | G2 | GSE9613 | 87563819 | 87564649 | 830 | 2505 |
| Fos | K562 | GSE19551 | 87566313 | 87566966 | 653 | 99 |
| Oct4 | hES | GSE21916 | 87566291 | 87566882 | 591 | 152 |
| TAF | k562 | GSE8489 | 87565310 | 87566242 | 932 | 963 |
| hScc1 | Bcell | GSE12603 | 87564146 | 87564760 | 614 | 2286 |
| hScc1 | CdLS | GSE12603 | 87564026 | 87564760 | 734 | 2346 |
| p130 | Quiescent | GSE19898 | 87566546 | 87566724 | 178 | 104 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 87601187 | 87601219 | 32 | 17366 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 87566721 | 87567248 | 527 | 0 |
| CTCF | G2 | GSE9613 | 87573448 | 87573813 | 365 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 87568520 | 87569493 | 973 | 0 |
| H3K4me3 | colorectal | cancer | 87567821 | 87569272 | 1451 | 0 |
| H3K4me3 | colorectal | cancer | 87570275 | 87571765 | 1490 | 0 |
| H3ac | HepG2 | E | 87567873 | 87569238 | 1365 | 0 |
| H3ac | HepG2 | E | 87571729 | 87572594 | 865 | 0 |
| PHF8 | HeLa | GSE20725 | 87566101 | 87567758 | 1657 | 0 |
| TAF | k562 | GSE8489 | 87567913 | 87569391 | 1478 | 0 |
| hScc1 | Bcell | GSE12603 | 87566612 | 87567570 | 958 | 0 |
| hScc1 | Bcell | GSE12603 | 87573218 | 87573910 | 692 | 0 |
| hScc1 | CdLS | GSE12603 | 87566612 | 87567523 | 911 | 0 |
| p130 | shRbQuiescent | GSE19898 | 87567585 | 87568097 | 512 | 0 |
Validated miRNA targets