AutismKB 2.0

Annotation Detail for CGGBP1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CGGBP1 ( CGGBP,p20-CGGBP )
Gene Full Name: CGG triplet repeat binding protein 1
Band: 3p11.1
Quick LinksEntrez ID:8545; OMIM: 603363; Uniprot ID:CGBP1_HUMAN; ENSEMBL ID: ENSG00000163320; HGNC ID: 1888
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
84Nuclear localization signal (Potential).
164Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
13N-linkedHMM predict
93N-linkedHMM predict
94Phosphoserine(IKK)HMM predict
155TyrosineHMM predict
155Phosphotyrosine(INSR)HMM predict
155Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001008390
  • Location:chr3 88183795-88190835
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 88190343 88191375 1032 24
Fos K562GSE19551 88190541 88191319 778 95
H3K4me3 colorectalcancer 88191642 88192769 1127 1370
H3ac HepG2E 88191353 88193355 2002 1519
Myc K562GSE19551 88208630 88208855 225 17907
Oct1 HelaGSE14283 88196922 88196951 29 6101
PHF8 293TGSE20725 88190046 88191917 1871 146
PHF8 HeLaGSE20725 88190042 88191669 1627 20
Rb GrowingGSE19898 88190799 88191159 360 144
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 88166543 88166579 36 17235
ER Fulvestrant-MCF7GSE14664 88166546 88166581 35 17232
Oct1 H2O2-HelaGSE14283 88166548 88166575 27 17234
Oct1 H2O2-HelaGSE14283 88178930 88178987 57 4837
Oct1 HelaGSE14283 88166160 88166189 29 17621
Oct1 HelaGSE14283 88166544 88166579 35 17234
Oct1 HelaGSE14283 88169543 88169572 29 14238
Oct1 HelaGSE14283 88178924 88178964 40 4852
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 88190226 88191169 943 0
ER E2-MCF7GSE14664 88190766 88190801 35 0
FOXA1 MCF7GSE15244 88187230 88187593 363 0
Myc hESGSE17917 88190715 88190899 184 0
Nanog hESGSE18292 88184214 88184602 388 0
Oct1 HelaGSE14283 88190768 88190799 31 0
RNAII Tamoxifen-MCF7GSE14664 88190765 88190803 38 0
Rb QuiescentGSE19898 88190396 88190723 327 0
hScc1 BcellGSE12603 88190226 88190530 304 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18357 mRNA ZNF654 chr3 88271164 88273912 79 mRNA CGGBP1 chr3 88187269 88281725Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved