AutismKB 2.0

Annotation Detail for FCN3


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Basic Information Top
Gene Symbol:FCN3 ( FCNH,HAKA1,MGC22543 )
Gene Full Name: ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)
Band: 1p36.11
Quick LinksEntrez ID:8547; OMIM: 604973; Uniprot ID:FCN3_HUMAN; ENSEMBL ID: ENSG00000142748; HGNC ID: 3625
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
50Hydroxyproline.
53Hydroxyproline.
59Hydroxyproline.
65Hydroxyproline.
68Hydroxyproline.
77Hydroxyproline.
189N-linked (GlcNAc...).
Location(AA) Modifications Resource
50Hydroxyproline.Swiss-Prot 53.0
53Hydroxyproline.Swiss-Prot 53.0
59Hydroxyproline.Swiss-Prot 53.0
65Hydroxyproline.Swiss-Prot 53.0
68Hydroxyproline.Swiss-Prot 53.0
77Hydroxyproline.Swiss-Prot 53.0
189N-linked (GlcNAc...).Swiss-Prot 53.0
Location(AA) Modification Resource
56O-linkedHMM predict
74O-linkedHMM predict
98Phosphoserine(ATM)HMM predict
189N-linkedHMM predict
290ProlineHMM predict
291TyrosineHMM predict
291Phosphotyrosine(Jak)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003665
  • Location:chr1 27568189-27573901
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NFkBII GM12878GSE19485 27568019 27569327 1308 0
hScc1 BcellGSE12603 27573015 27573394 379 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018