Annotation Detail for PRPF18
Basic Information Top
| Gene Symbol: | PRPF18 ( FLJ10210,PRP18,hPrp18 ) |
|---|---|
| Gene Full Name: | PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) |
| Band: | 10p13 |
| Quick Links | Entrez ID:8559; OMIM: 604993; Uniprot ID:PRP18_HUMAN; ENSEMBL ID: ENSG00000165630; HGNC ID: 17351 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 41 | Phosphotyrosine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 27 | Phosphotyrosine(Jak) | HMM predict |
| 103 | Phosphotyrosine(EGFR) | HMM predict |
| 103 | Phosphotyrosine(Syk) | HMM predict |
| 153 | Phosphothreonine(CK2) | HMM predict |
| 163 | N-linked | HMM predict |
- RefSeq ID: NM_003675
- Location:chr10 13668944-13712872
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 13668735 | 13669116 | 381 | 19 |
| CTCF | CD4 | SISSRdata | 13668735 | 13669116 | 381 | 19 |
| ER | Fulvestrant-MCF7 | GSE14664 | 13657744 | 13657827 | 83 | 11159 |
| GABP | k562 | GSE8489 | 13668304 | 13669303 | 999 | 141 |
| Myc | K562 | GSE19551 | 13668630 | 13669173 | 543 | 43 |
| Oct1 | H2O2-Hela | GSE14283 | 13651392 | 13651423 | 31 | 17537 |
| Oct1 | H2O2-Hela | GSE14283 | 13656529 | 13656559 | 30 | 12401 |
| P300 | T30-glioblastoma | GSE21026 | 13668634 | 13669239 | 605 | 8 |
| Rb | Quiescent | GSE19898 | 13668419 | 13668577 | 158 | 447 |
| STAT1 | IFN | SISSRdata | 13668593 | 13669206 | 613 | 45 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 13695657 | 13695776 | 119 | 0 |
| CTCF | CD4 | SISSRdata | 13695657 | 13695776 | 119 | 0 |
| ETS1 | Jurkat | GSE17954 | 13668463 | 13669433 | 970 | 0 |
| FoxA1 | MCF7 | MACSdata | 13696810 | 13697043 | 233 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 13688620 | 13688651 | 31 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 13690107 | 13690148 | 41 | 0 |
| Oct1 | Hela | GSE14283 | 13688613 | 13688658 | 45 | 0 |
| Oct1 | Hela | GSE14283 | 13690108 | 13690149 | 41 | 0 |
| Oct4 | hES | GSE17917 | 13709794 | 13710095 | 301 | 0 |
| Oct4 | hES | GSE21916 | 13709646 | 13710138 | 492 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 13668604 | 13669514 | 910 | 0 |
| RARA | MCF7 | GSE15244 | 13696742 | 13697310 | 568 | 0 |
| RARG | MCF7 | GSE15244 | 13696705 | 13697205 | 500 | 0 |
| TFAP2C | MCF7 | GSE21234 | 13696673 | 13697290 | 617 | 0 |
| p130 | Senescent | GSE19898 | 13668833 | 13669075 | 242 | 0 |
Validated miRNA targets