AutismKB 2.0

Annotation Detail for SKAP1


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Basic Information Top
Gene Symbol:SKAP1 ( SCAP1,SKAP55 )
Gene Full Name: src kinase associated phosphoprotein 1
Band: 17q21.32
Quick LinksEntrez ID:8631; OMIM: 604969; Uniprot ID:SKAP1_HUMAN; ENSEMBL ID: ENSG00000141293; HGNC ID: 15605
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
142Phosphotyrosine.
219Phosphotyrosine (Probable).
232Phosphotyrosine (Probable).
271Phosphotyrosine; by FYN.
295Phosphotyrosine; by FYN (Probable).
Location(AA) Modifications Resource
219Phosphotyrosine (Probable).Swiss-Prot 53.0
232Phosphotyrosine (Probable).Swiss-Prot 53.0
271Phosphotyrosine (by FYN).Swiss-Prot 53.0
295Phosphotyrosine (by FYN) (Probable).Swiss-Prot 53.0
Location(AA) Modification Resource
67Phosphoserine(CK2)HMM predict
71N-linkedHMM predict
172Phosphoserine(PKC)HMM predict
172Phosphoserine(PKG)HMM predict
172Phosphoserine(CAMK2)HMM predict
172Phosphoserine(CK1)HMM predict
194Phosphoserine(CDC2)HMM predict
232Phosphotyrosine(INSR)HMM predict
232Phosphotyrosine(Syk)HMM predict
232Phosphotyrosine(SRC)HMM predict
242Phosphoserine(IKK)HMM predict
245Phosphoserine(IKK)HMM predict
271PhosphotyrosineHMM predict
271Phosphotyrosine(Syk)HMM predict
271Phosphotyrosine(SRC)HMM predict
271Phosphotyrosine(EGFR)HMM predict
271SulfotyrosineHMM predict
288Phosphothreonine(PKC)HMM predict
295Phosphotyrosine(INSR)HMM predict
328Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003726
  • Location:chr17 43565800-43862592
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 43875083 43875715 632 12807
GABP k562GSE8489 43874897 43875792 895 12752
H3K27me3 colorectalcancer 43862856 43863251 395 461
H3K27me3 colorectalcancer 43863698 43864475 777 1494
H3K27me3 colorectalcancer 43864871 43865677 806 2682
RARG MCF7GSE15244 43877353 43877785 432 14977
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 43563584 43564020 436 1999
CTCF CD4SISSRdata 43563584 43564020 436 1999
CTCF G2GSE9613 43563556 43564100 544 1973
hScc1 BcellGSE12603 43563458 43564100 642 2022
hScc1 CdLSGSE12603 43563458 43564100 642 2022
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 43740167 43740505 338 0
CTCF CD4GSE12889 43784194 43784446 252 0
CTCF CD4GSE12889 43807136 43807367 231 0
CTCF CD4SISSRdata 43740167 43740505 338 0
CTCF CD4SISSRdata 43784194 43784446 252 0
CTCF CD4SISSRdata 43807136 43807367 231 0
CTCF HelaGSE12889 43648048 43648236 188 0
CTCF G2GSE9613 43647850 43648253 403 0
CTCF G2GSE9613 43692232 43692443 211 0
CTCF G2GSE9613 43693674 43694031 357 0
CTCF G2GSE9613 43740185 43740447 262 0
CTCF G2GSE9613 43806918 43807291 373 0
FOXA1 MCF7GSE15244 43592802 43593589 787 0
Fos K562GSE19551 43664469 43664826 357 0
FoxA1 MCF7MACSdata 43592938 43593408 470 0
GABP HelaGSE8489 43592802 43593263 461 0
GABP HelaGSE8489 43625706 43626035 329 0
Gata2 K562GSE18868 43651873 43652455 582 0
Myc K562GSE19551 43687314 43687679 365 0
Myc K562GSE19551 43743307 43743730 423 0
Myc K562GSE19551 43860078 43860445 367 0
Myc hESGSE17917 43614050 43614570 520 0
Nanog ESGSE20650 43652012 43652495 483 0
Nanog ESGSE20650 43743376 43743666 290 0
Nanog hESGSE18292 43624555 43624965 410 0
Nanog hESGSE18292 43657442 43657931 489 0
Oct1 H2O2-HelaGSE14283 43692800 43692834 34 0
Oct1 HelaGSE14283 43596173 43596210 37 0
Oct1 HelaGSE14283 43664982 43665041 59 0
Oct1 HelaGSE14283 43675419 43675460 41 0
Oct4 hESGSE17917 43614084 43614356 272 0
Oct4 hESGSE21916 43591996 43592442 446 0
P300 T30-glioblastomaGSE21026 43608017 43609163 1146 0
RARA MCF7GSE15244 43592849 43593807 958 0
RARA MCF7GSE15244 43672739 43674129 1390 0
RARA MCF7GSE15244 43743026 43744340 1314 0
RARG MCF7GSE15244 43580533 43581104 571 0
RARG MCF7GSE15244 43592802 43593518 716 0
RARG MCF7GSE15244 43658074 43658396 322 0
RARG MCF7GSE15244 43672898 43673985 1087 0
RARG MCF7GSE15244 43743101 43744271 1170 0
TFAP2C MCF7GSE21234 43580734 43581074 340 0
TFAP2C MCF7GSE21234 43592768 43593630 862 0
USF1 HepG2E 43586364 43587089 725 0
USF1 HepG2E 43588248 43588592 344 0
hScc1 BcellGSE12603 43647850 43648325 475 0
hScc1 BcellGSE12603 43740225 43740560 335 0
hScc1 BcellGSE12603 43768322 43768758 436 0
hScc1 BcellGSE12603 43784188 43784733 545 0
hScc1 CdLSGSE12603 43647850 43648289 439 0
hScc1 CdLSGSE12603 43693737 43694133 396 0
hScc1 CdLSGSE12603 43768322 43768758 436 0
hScc1 CdLSGSE12603 43784041 43784814 773 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
11313 mRNA chr17 43726705 43740036 13331 mRNA SCAP1 chr17 43565803 43862551 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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