AutismKB 2.0

Annotation Detail for RUNX3


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Basic Information Top
Gene Symbol:RUNX3 ( AML2,CBFA3,FLJ34510,MGC16070,PEBP2aC )
Gene Full Name: runt-related transcription factor 3
Band: 1p36.11
Quick LinksEntrez ID:864; OMIM: 600210; Uniprot ID:RUNX3_HUMAN; ENSEMBL ID: ENSG00000020633; HGNC ID: 10473
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
243Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
10O-linkedHMM predict
14PhosphothreonineHMM predict
14Phosphothreonine(PKA)HMM predict
17Phosphoserine(CDC2)HMM predict
17Phosphoserine(CDK)HMM predict
17O-linkedHMM predict
86N-linkedHMM predict
149Phosphoserine(IKK)HMM predict
155O-linkedHMM predict
155O-linkedHMM predict
159N-linkedHMM predict
209Phosphothreonine(PKA)HMM predict
211Phosphoserine(IKK)HMM predict
211O-linkedHMM predict
212Phosphothreonine(CDK)HMM predict
212Phosphothreonine(MAPK)HMM predict
214Phosphoserine(CDC2)HMM predict
214O-linkedHMM predict
214Phosphoserine(IKK)HMM predict
218O-linkedHMM predict
226O-linkedHMM predict
227Phosphoserine(IKK)HMM predict
231Phosphothreonine(MAPK)HMM predict
231Phosphothreonine(CDC2)HMM predict
281O-linkedHMM predict
281O-linkedHMM predict
283O-linkedHMM predict
287O-linkedHMM predict
288O-linkedHMM predict
288Phosphoserine(IKK)HMM predict
290O-linkedHMM predict
293Phosphoserine(IKK)HMM predict
307Phosphotyrosine(Abl)HMM predict
318N-linkedHMM predict
326N-linkedHMM predict
366Phosphoserine(IKK)HMM predict
395PhosphoserineHMM predict
397Phosphoserine(CDK)HMM predict
397Phosphoserine(MAPK)HMM predict
399O-linkedHMM predict
403Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001031680
  • Location:chr1 25098589-25164087
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 25164055 25164217 162 49
p130 SenescentGSE19898 25169483 25169732 249 5520
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 25146196 25148268 2072 0
CBP T30-glioblastomaGSE21026 25148069 25148825 756 0
CTCF CD4GSE12889 25131319 25131578 259 0
CTCF CD4GSE12889 25151697 25151880 183 0
CTCF CD4GSE12889 25162679 25162882 203 0
CTCF CD4SISSRdata 25131319 25131578 259 0
CTCF CD4SISSRdata 25151697 25151880 183 0
CTCF CD4SISSRdata 25162679 25162882 203 0
CTCF G2GSE9613 25131129 25131809 680 0
CTCF G2GSE9613 25155124 25155337 213 0
CTCF G2GSE9613 25158154 25158547 393 0
CTCF G2GSE9613 25161478 25161757 279 0
CTCF G2GSE9613 25162242 25162964 722 0
NFkBII GM12878GSE19485 25134171 25135613 1442 0
Nanog hESGSE18292 25137625 25137896 271 0
Oct1 HelaGSE14283 25135666 25135703 37 0
Oct4 hESGSE21916 25149349 25149874 525 0
P300 T30-glioblastomaGSE21026 25148073 25148874 801 0
TFAP2C MCF7GSE21234 25154221 25154696 475 0
VDR GM10855-stimGSE22484 25150287 25154730 4443 0
VDR GM10861-stimGSE22484 25151063 25152421 1358 0
hScc1 BcellGSE12603 25129414 25129879 465 0
hScc1 BcellGSE12603 25130931 25131809 878 0
hScc1 BcellGSE12603 25133996 25134430 434 0
hScc1 BcellGSE12603 25161725 25163338 1613 0
hScc1 CdLSGSE12603 25131167 25132055 888 0
hScc1 G2GSE9613 25130767 25131909 1142 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-130b hsa-mir-130b 22 20176475
hsa-miR-130b* hsa-mir-130b 22 20176475
hsa-miR-532-3p hsa-mir-532 X 19336521
hsa-miR-532-5p hsa-mir-532 X 19336521
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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