AutismKB 2.0

Annotation Detail for B4GALT3


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Basic Information Top
Gene Symbol:B4GALT3 ( beta4Gal-T3 )
Gene Full Name: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
Band: 1q23.3
Quick LinksEntrez ID:8703; OMIM: 604014; Uniprot ID:B4GT3_HUMAN; ENSEMBL ID: ENSG00000158850; HGNC ID: 926
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
57N-linked (GlcNAc...) (Potential).
166N-linked (GlcNAc...) (Potential).
337N-linked (GlcNAc...) (Potential).
385N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
57N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
166N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
337N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
385N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
48SulfotyrosineHMM predict
91Phosphoserine(IKK)HMM predict
93Phosphoserine(ATM)HMM predict
93Phosphoserine(CDK)HMM predict
93Phosphoserine(CDC2)HMM predict
93O-linkedHMM predict
166N-linkedHMM predict
170N-linkedHMM predict
226Phosphotyrosine(INSR)HMM predict
245Phosphotyrosine(Jak)HMM predict
245Phosphotyrosine(INSR)HMM predict
277Phosphoserine(PKG)HMM predict
313Phosphoserine(IKK)HMM predict
337N-linkedHMM predict
382O-linkedHMM predict
385N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003779
  • Location:chr1 159407724-159413937
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 159417064 159417452 388 3321
CTCF CD4SISSRdata 159417064 159417452 388 3321
CTCF JurkatGSE12889 159417205 159417308 103 3319
CTCF G2GSE9613 159416738 159417246 508 3055
H3ac HepG2E 159414178 159414727 549 515
P300 T0-glioblastomaGSE21026 159413579 159414519 940 112
PHF8 293TGSE20725 159413217 159414713 1496 28
TAF HelaGSE8489 159414178 159414727 549 515
TAF k562GSE8489 159414178 159414727 549 515
USF2 HepG2E 159414508 159414727 219 680
hScc1 CdLSGSE12603 159417002 159417495 493 3311
p130 shRbSenescentGSE19898 159413952 159414206 254 142
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 159407495 159408257 762 0
CTCF G2GSE9613 159412322 159412603 281 0
CTCF G2GSE9613 159413575 159413892 317 0
H3K4me2 HCT116GSE10453 159412505 159413303 798 0
H3K4me3 colorectalcancer 159412821 159413340 519 0
H3ac HepG2E 159412785 159413649 864 0
Myc hESGSE17917 159413684 159413959 275 0
P300 T30-glioblastomaGSE21026 159413324 159414407 1083 0
PHF8 HeLaGSE20725 159413209 159414529 1320 0
PHF8 Hs68plusFBSGSE20725 159413414 159414392 978 0
Rb QuiescentGSE19898 159413700 159413904 204 0
SRF HepG2GSE8489 159410862 159411261 399 0
TAF k562GSE8489 159411048 159412205 1157 0
hScc1 BcellGSE12603 159413575 159413868 293 0
p130 SenescentGSE19898 159413602 159413821 219 0
p130 shRbQuiescentGSE19898 159413604 159414185 581 0
p130 shRbSenescentGSE19898 159413505 159413928 423 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1826 mRNA PPOX chr1 157949342 157960874 102 mRNA B4GALT3 chr1 157954173 157960387Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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