AutismKB 2.0

Annotation Detail for TNFRSF25


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Basic Information Top
Gene Symbol:TNFRSF25 ( APO-3,DDR3,DR3,LARD,TNFRSF12,TR3,TRAMP,WSL-1,WSL-LR )
Gene Full Name: tumor necrosis factor receptor superfamily, member 25
Band: 1p36.31
Quick LinksEntrez ID:8718; OMIM: 603366; Uniprot ID:TNR25_HUMAN; ENSEMBL ID: ENSG00000215788; HGNC ID: 11910
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
67N-linked (GlcNAc...) (Potential).
106N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
67N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
106N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
47S-palmitoylHMM predict
48S-palmitoylHMM predict
67N-linkedHMM predict
106N-linkedHMM predict
141S-palmitoylHMM predict
160Phosphothreonine(PKA)HMM predict
245Phosphothreonine(MAPK)HMM predict
245PhosphothreonineHMM predict
253O-linkedHMM predict
315O-linkedHMM predict
317O-linkedHMM predict
317Phosphoserine(ATM)HMM predict
317Phosphoserine(MAPK)HMM predict
317Phosphoserine(CDC2)HMM predict
320Phosphoserine(CDC2)HMM predict
320Phosphoserine(IKK)HMM predict
320O-linkedHMM predict
324Phosphoserine(CDC2)HMM predict
324PhosphoserineHMM predict
324O-linkedHMM predict
336Phosphotyrosine(SRC)HMM predict
336Phosphotyrosine(INSR)HMM predict
336Phosphotyrosine(Syk)HMM predict
376Phosphotyrosine(Syk)HMM predict
411SerineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_003790
  • Location:chr1 6443807-6448841
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 6444778 6445150 372 0
CTCF G2GSE9613 6445438 6445762 324 0
hScc1 BcellGSE12603 6445039 6445692 653 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
129 EST chr1 6455295 6455696 191 mRNA TNFRSF25 chr1 6455481 6460521Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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