Annotation Detail for RAB11A
Basic Information Top
| Gene Symbol: | RAB11A ( MGC1490,YL8 ) |
|---|---|
| Gene Full Name: | RAB11A, member RAS oncogene family |
| Band: | 15q22.31 |
| Quick Links | Entrez ID:8766; OMIM: 605570; Uniprot ID:RB11A_HUMAN; ENSEMBL ID: ENSG00000103769; HGNC ID: 9760 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylglycine. | |
| 48 | Effector region (By similarity). | |
| 213 | Cysteine methyl ester (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-acetylglycine. | Swiss-Prot 53.0 |
| 212 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| 213 | S-geranylgeranyl cysteine (Bysimilarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 124 | N-linked | HMM predict |
| 158 | O-linked | HMM predict |
| 190 | Phosphoserine(IKK) | HMM predict |
| 212 | S-farnesyl | HMM predict |
| 213 | Cysteine | HMM predict |
| 213 | S-farnesyl | HMM predict |
- RefSeq ID: NM_004663
- Location:chr15 63948849-63968844
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 63936334 | 63936615 | 281 | 12375 |
| CTCF | CD4 | GSE12889 | 63942026 | 63942282 | 256 | 6696 |
| CTCF | CD4 | SISSRdata | 63936334 | 63936615 | 281 | 12375 |
| CTCF | CD4 | SISSRdata | 63942026 | 63942282 | 256 | 6696 |
| CTCF | G2 | GSE9613 | 63942177 | 63942323 | 146 | 6600 |
| ETS1 | Jurkat | GSE17954 | 63948157 | 63949451 | 1294 | 46 |
| GABP | k562 | GSE8489 | 63947839 | 63948893 | 1054 | 484 |
| Myc | K562 | GSE19551 | 63936297 | 63936531 | 234 | 12436 |
| Myc | K562 | GSE19551 | 63942075 | 63942477 | 402 | 6574 |
| Oct1 | Hela | GSE14283 | 63936568 | 63936598 | 30 | 12267 |
| PHF8 | Hs68minusFBS | GSE20725 | 63948059 | 63949423 | 1364 | 109 |
| Pol3 | K562 | GSE19551 | 63948168 | 63948914 | 746 | 309 |
| Rb | Senescent | GSE19898 | 63948376 | 63949118 | 742 | 103 |
| p130 | Quiescent | GSE19898 | 63948470 | 63949222 | 752 | 4 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 63948815 | 63949122 | 307 | 0 |
| CTCF | CD4 | SISSRdata | 63948815 | 63949122 | 307 | 0 |
| CTCF | G2 | GSE9613 | 63948656 | 63949455 | 799 | 0 |
| H3K4me3 | colorectal | cancer | 63949683 | 63950159 | 476 | 0 |
| H3ac | HepG2 | E | 63948539 | 63950761 | 2222 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 63949381 | 63949424 | 43 | 0 |
| PHF8 | 293T | GSE20725 | 63948254 | 63949762 | 1508 | 0 |
| PHF8 | HeLa | GSE20725 | 63948370 | 63949811 | 1441 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 63948080 | 63949721 | 1641 | 0 |
| Rb | Growing | GSE19898 | 63948903 | 63949096 | 193 | 0 |
| Rb | Quiescent | GSE19898 | 63948777 | 63949312 | 535 | 0 |
| Rb | shRbQuiescent | GSE19898 | 63948847 | 63949071 | 224 | 0 |
| Rb | shRbSenescence | GSE19898 | 63948862 | 63949066 | 204 | 0 |
| TAF | Hela | GSE8489 | 63950159 | 63950659 | 500 | 0 |
| hScc1 | Bcell | GSE12603 | 63948755 | 63949212 | 457 | 0 |
| p130 | Senescent | GSE19898 | 63948406 | 63949423 | 1017 | 0 |
| p130 | shRbQuiescent | GSE19898 | 63948356 | 63950127 | 1771 | 0 |
| p130 | shRbSenescent | GSE19898 | 63948874 | 63949408 | 534 | 0 |
Validated miRNA targets